Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sec61a1P61620 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sec61a1P61620 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Sec61a1P61620 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.03■□□□□ 0.96
Sec61a1P61620 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Sec61a1P61620 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sec61a1P61620 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sec61a1P61620 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sec61a1P61620 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sec61a1P61620 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Sec61a1P61620 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sec61a1P61620 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sec61a1P61620 Gm9397-201ENSMUST00000200125 605 ntBASIC21■□□□□ 0.95
Sec61a1P61620 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Sec61a1P61620 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sec61a1P61620 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.99■□□□□ 0.95
Sec61a1P61620 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Sec61a1P61620 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sec61a1P61620 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sec61a1P61620 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Sec61a1P61620 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sec61a1P61620 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.97■□□□□ 0.95
Sec61a1P61620 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sec61a1P61620 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.97■□□□□ 0.95
Sec61a1P61620 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sec61a1P61620 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.96■□□□□ 0.95
Sec61a1P61620 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sec61a1P61620 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec61a1P61620 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sec61a1P61620 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sec61a1P61620 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.95■□□□□ 0.94
Sec61a1P61620 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sec61a1P61620 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Sec61a1P61620 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sec61a1P61620 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec61a1P61620 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Sec61a1P61620 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Sec61a1P61620 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec61a1P61620 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sec61a1P61620 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Sec61a1P61620 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec61a1P61620 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sec61a1P61620 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Sec61a1P61620 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec61a1P61620 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sec61a1P61620 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sec61a1P61620 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.91■□□□□ 0.94
Sec61a1P61620 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sec61a1P61620 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec61a1P61620 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec61a1P61620 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sec61a1P61620 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.9■□□□□ 0.94
Sec61a1P61620 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sec61a1P61620 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec61a1P61620 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec61a1P61620 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sec61a1P61620 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.89■□□□□ 0.93
Sec61a1P61620 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Sec61a1P61620 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sec61a1P61620 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sec61a1P61620 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.86■□□□□ 0.93
Sec61a1P61620 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sec61a1P61620 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Sec61a1P61620 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Sec61a1P61620 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sec61a1P61620 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sec61a1P61620 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sec61a1P61620 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sec61a1P61620 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sec61a1P61620 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sec61a1P61620 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sec61a1P61620 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.83■□□□□ 0.93
Sec61a1P61620 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.93
Sec61a1P61620 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.83■□□□□ 0.93
Sec61a1P61620 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.83■□□□□ 0.93
Sec61a1P61620 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sec61a1P61620 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Sec61a1P61620 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sec61a1P61620 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sec61a1P61620 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sec61a1P61620 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sec61a1P61620 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sec61a1P61620 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Sec61a1P61620 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sec61a1P61620 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Sec61a1P61620 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sec61a1P61620 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.8■□□□□ 0.92
Sec61a1P61620 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sec61a1P61620 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sec61a1P61620 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Sec61a1P61620 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sec61a1P61620 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Sec61a1P61620 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sec61a1P61620 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.78■□□□□ 0.92
Sec61a1P61620 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Sec61a1P61620 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Sec61a1P61620 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sec61a1P61620 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Sec61a1P61620 Gm24970-201ENSMUST00000175582 82 ntBASIC20.77■□□□□ 0.92
Sec61a1P61620 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms