Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.8■■■□□ 2.04
Hmgcs2P54869 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.79■■■□□ 2.04
Hmgcs2P54869 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Hmgcs2P54869 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.78■■■□□ 2.04
Hmgcs2P54869 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Hmgcs2P54869 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.77■■■□□ 2.04
Hmgcs2P54869 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.04
Hmgcs2P54869 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.76■■■□□ 2.03
Hmgcs2P54869 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Hmgcs2P54869 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.75■■■□□ 2.03
Hmgcs2P54869 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.74■■■□□ 2.03
Hmgcs2P54869 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Hmgcs2P54869 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Hmgcs2P54869 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
Hmgcs2P54869 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Hmgcs2P54869 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Hmgcs2P54869 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.71■■■□□ 2.03
Hmgcs2P54869 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Hmgcs2P54869 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Hmgcs2P54869 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Hmgcs2P54869 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.69■■■□□ 2.02
Hmgcs2P54869 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Hmgcs2P54869 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.67■■■□□ 2.02
Hmgcs2P54869 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Hmgcs2P54869 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.66■■■□□ 2.02
Hmgcs2P54869 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Hmgcs2P54869 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Hmgcs2P54869 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Hmgcs2P54869 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.64■■■□□ 2.02
Hmgcs2P54869 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Hmgcs2P54869 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.63■■■□□ 2.01
Hmgcs2P54869 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.62■■■□□ 2.01
Hmgcs2P54869 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.62■■■□□ 2.01
Hmgcs2P54869 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.62■■■□□ 2.01
Hmgcs2P54869 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Hmgcs2P54869 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.61■■■□□ 2.01
Hmgcs2P54869 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Hmgcs2P54869 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Hmgcs2P54869 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Hmgcs2P54869 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
Hmgcs2P54869 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Hmgcs2P54869 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Hmgcs2P54869 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Hmgcs2P54869 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Hmgcs2P54869 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.58■■■□□ 2.01
Hmgcs2P54869 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
Hmgcs2P54869 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
Hmgcs2P54869 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.57■■■□□ 2
Hmgcs2P54869 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.57■■■□□ 2
Hmgcs2P54869 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Hmgcs2P54869 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Hmgcs2P54869 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.54■■■□□ 2
Hmgcs2P54869 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.53■■■□□ 2
Hmgcs2P54869 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.53■■■□□ 2
Hmgcs2P54869 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.53■■■□□ 2
Hmgcs2P54869 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.51■■■□□ 2
Hmgcs2P54869 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.51■■□□□ 1.99
Hmgcs2P54869 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
Hmgcs2P54869 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Hmgcs2P54869 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Hmgcs2P54869 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
Hmgcs2P54869 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.49■■□□□ 1.99
Hmgcs2P54869 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
Hmgcs2P54869 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Hmgcs2P54869 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
Hmgcs2P54869 Gm11175-201ENSMUST00000116172 543 ntBASIC27.46■■□□□ 1.99
Hmgcs2P54869 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Hmgcs2P54869 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.45■■□□□ 1.98
Hmgcs2P54869 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.45■■□□□ 1.98
Hmgcs2P54869 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Hmgcs2P54869 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.44■■□□□ 1.98
Hmgcs2P54869 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.43■■□□□ 1.98
Hmgcs2P54869 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Hmgcs2P54869 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
Hmgcs2P54869 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Hmgcs2P54869 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Hmgcs2P54869 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
Hmgcs2P54869 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Hmgcs2P54869 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Hmgcs2P54869 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Hmgcs2P54869 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Hmgcs2P54869 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Hmgcs2P54869 Mir6538-201ENSMUST00000183713 110 ntBASIC27.38■■□□□ 1.97
Hmgcs2P54869 Gm30023-201ENSMUST00000197970 889 ntBASIC27.38■■□□□ 1.97
Hmgcs2P54869 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Hmgcs2P54869 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
Hmgcs2P54869 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Hmgcs2P54869 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Hmgcs2P54869 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Hmgcs2P54869 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Hmgcs2P54869 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Hmgcs2P54869 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
Hmgcs2P54869 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Hmgcs2P54869 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Hmgcs2P54869 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.33■■□□□ 1.97
Hmgcs2P54869 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Hmgcs2P54869 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Hmgcs2P54869 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Hmgcs2P54869 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.32■■□□□ 1.96
Hmgcs2P54869 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.31■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms