Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 ACO2YJL200C 2370 nt10.39□□□□□ -0.75
RPT4P53549 LYS20YDL182W 1287 nt10.39□□□□□ -0.75
RPT4P53549 QDR2YIL121W 1629 nt10.39□□□□□ -0.75
RPT4P53549 ADE8YDR408C 645 nt10.37□□□□□ -0.75
RPT4P53549 FLX1YIL134W 936 nt10.36□□□□□ -0.75
RPT4P53549 ABZ2YMR289W 1125 nt10.36□□□□□ -0.75
RPT4P53549 THP3YPR045C 1413 nt10.35□□□□□ -0.75
RPT4P53549 TVP23YDR084C 600 nt10.34□□□□□ -0.75
RPT4P53549 ERG13YML126C 1476 nt10.34□□□□□ -0.75
RPT4P53549 CWC15YDR163W 528 nt10.33□□□□□ -0.76
RPT4P53549 ALG12YNR030W 1656 nt10.33□□□□□ -0.76
RPT4P53549 PHB2YGR231C 933 nt10.32□□□□□ -0.76
RPT4P53549 SPE2YOL052C 1191 nt10.32□□□□□ -0.76
RPT4P53549 BUD20YLR074C 501 nt10.31□□□□□ -0.76
RPT4P53549 ASP3-1YLR155C 1089 nt10.31□□□□□ -0.76
RPT4P53549 ASP3-2YLR157C 1089 nt10.31□□□□□ -0.76
RPT4P53549 ASP3-3YLR158C 1089 nt10.31□□□□□ -0.76
RPT4P53549 ASP3-4YLR160C 1089 nt10.31□□□□□ -0.76
RPT4P53549 ADH3YMR083W 1128 nt10.31□□□□□ -0.76
RPT4P53549 PBP1YGR178C 2169 nt10.31□□□□□ -0.76
RPT4P53549 OPI3YJR073C 621 nt10.29□□□□□ -0.76
RPT4P53549 RDN25-1RDN25-1 3396 nt10.27□□□□□ -0.77
RPT4P53549 RDN25-2RDN25-2 3396 nt10.27□□□□□ -0.77
RPT4P53549 FSH2YMR222C 672 nt10.26□□□□□ -0.77
RPT4P53549 UME6YDR207C 2511 nt10.25□□□□□ -0.77
RPT4P53549 SER2YGR208W 930 nt10.24□□□□□ -0.77
RPT4P53549 VPS62YGR141W 1404 nt10.24□□□□□ -0.77
RPT4P53549 YMR007WYMR007W 381 nt10.23□□□□□ -0.77
RPT4P53549 SAC7YDR389W 1965 nt10.21□□□□□ -0.78
RPT4P53549 TPC1YGR096W 945 nt10.2□□□□□ -0.78
RPT4P53549 MOB1YIL106W 945 nt10.2□□□□□ -0.78
RPT4P53549 CYC3YAL039C 810 nt10.18□□□□□ -0.78
RPT4P53549 CYT2YKL087C 675 nt10.18□□□□□ -0.78
RPT4P53549 BET2YPR176C 978 nt10.18□□□□□ -0.78
RPT4P53549 ENO2YHR174W 1314 nt10.17□□□□□ -0.78
RPT4P53549 YDL086WYDL086W 822 nt10.17□□□□□ -0.78
RPT4P53549 AMF1YOR378W 1548 nt10.17□□□□□ -0.78
RPT4P53549 AIM1YAL046C 357 nt10.16□□□□□ -0.78
RPT4P53549 HTS1YPR033C 1641 nt10.15□□□□□ -0.78
RPT4P53549 RCR1YBR005W 642 nt10.15□□□□□ -0.78
RPT4P53549 PAU21YOR394W 495 nt10.15□□□□□ -0.78
RPT4P53549 PAU22YPL282C 495 nt10.15□□□□□ -0.78
RPT4P53549 DIG1YPL049C 1359 nt10.14□□□□□ -0.79
RPT4P53549 PCP1YGR101W 1041 nt10.13□□□□□ -0.79
RPT4P53549 YKR012CYKR012C 378 nt10.13□□□□□ -0.79
RPT4P53549 YOR343CYOR343C 327 nt10.13□□□□□ -0.79
RPT4P53549 TGA1tA(UGC)A 73 nt10.11□□□□□ -0.79
RPT4P53549 tA(UGC)EtA(UGC)E 73 nt10.11□□□□□ -0.79
RPT4P53549 tA(UGC)GtA(UGC)G 73 nt10.11□□□□□ -0.79
RPT4P53549 tA(UGC)LtA(UGC)L 73 nt10.11□□□□□ -0.79
RPT4P53549 tA(UGC)OtA(UGC)O 73 nt10.11□□□□□ -0.79
RPT4P53549 NAR1YNL240C 1476 nt10.1□□□□□ -0.79
RPT4P53549 YNR064CYNR064C 873 nt10.09□□□□□ -0.79
RPT4P53549 LEU2YCL018W 1095 nt10.09□□□□□ -0.79
RPT4P53549 LSB6YJL100W 1824 nt10.09□□□□□ -0.79
RPT4P53549 SDS24YBR214W 1584 nt10.09□□□□□ -0.79
RPT4P53549 YGR210CYGR210C 1236 nt10.08□□□□□ -0.8
RPT4P53549 YIL100C-AYIL100C-A 339 nt10.08□□□□□ -0.8
RPT4P53549 NAM8YHR086W 1572 nt10.07□□□□□ -0.8
RPT4P53549 RPL12BYDR418W 498 nt10.07□□□□□ -0.8
RPT4P53549 SRP102YKL154W 735 nt10.07□□□□□ -0.8
RPT4P53549 YAT1YAR035W 2064 nt10.06□□□□□ -0.8
RPT4P53549 ERO1YML130C 1692 nt10.06□□□□□ -0.8
RPT4P53549 ENT4YLL038C 744 nt10.05□□□□□ -0.8
RPT4P53549 GRH1YDR517W 1119 nt10.04□□□□□ -0.8
RPT4P53549 YAL016C-AYAL016C-A 315 nt10.04□□□□□ -0.8
RPT4P53549 FCY1YPR062W 477 nt10.04□□□□□ -0.8
RPT4P53549 VBA3YCL069W 1377 nt10.03□□□□□ -0.8
RPT4P53549 HRA1HRA1 564 nt10.03□□□□□ -0.8
RPT4P53549 YLR280CYLR280C 351 nt10.03□□□□□ -0.8
RPT4P53549 YOR325WYOR325W 474 nt10.03□□□□□ -0.8
RPT4P53549 ENO1YGR254W 1314 nt10.03□□□□□ -0.8
RPT4P53549 CCT2YIL142W 1584 nt10.02□□□□□ -0.81
RPT4P53549 SWT21YNL187W 1074 nt10.02□□□□□ -0.81
RPT4P53549 ELO1YJL196C 933 nt10.01□□□□□ -0.81
RPT4P53549 SFL1YOR140W 2301 nt10.01□□□□□ -0.81
RPT4P53549 EMC3YKL207W 762 nt9.99□□□□□ -0.81
RPT4P53549 INA1YLR413W 2028 nt9.99□□□□□ -0.81
RPT4P53549 YJL160CYJL160C 864 nt9.98□□□□□ -0.81
RPT4P53549 YLR046CYLR046C 813 nt9.98□□□□□ -0.81
RPT4P53549 OPI10YOL032W 741 nt9.98□□□□□ -0.81
RPT4P53549 RPC82YPR190C 1965 nt9.97□□□□□ -0.81
RPT4P53549 REX2YLR059C 810 nt9.97□□□□□ -0.81
RPT4P53549 YPL108WYPL108W 507 nt9.97□□□□□ -0.81
RPT4P53549 KEL3YPL263C 1956 nt9.97□□□□□ -0.81
RPT4P53549 ILV3YJR016C 1758 nt9.94□□□□□ -0.82
RPT4P53549 YOR268CYOR268C 399 nt9.94□□□□□ -0.82
RPT4P53549 ITR2YOL103W 1830 nt9.93□□□□□ -0.82
RPT4P53549 MET1YKR069W 1782 nt9.93□□□□□ -0.82
RPT4P53549 YKL053WYKL053W 375 nt9.92□□□□□ -0.82
RPT4P53549 SUV3YPL029W 2214 nt9.91□□□□□ -0.82
RPT4P53549 YMR210WYMR210W 1350 nt9.9□□□□□ -0.82
RPT4P53549 DLD3YEL071W 1491 nt9.88□□□□□ -0.83
RPT4P53549 MRP1YDR347W 966 nt9.88□□□□□ -0.83
RPT4P53549 SRP54YPR088C 1626 nt9.88□□□□□ -0.83
RPT4P53549 MFG1YDL233W 1377 nt9.87□□□□□ -0.83
RPT4P53549 EDC2YER035W 438 nt9.86□□□□□ -0.83
RPT4P53549 YFR020WYFR020W 699 nt9.86□□□□□ -0.83
RPT4P53549 CRC1YOR100C 984 nt9.85□□□□□ -0.83
RPT4P53549 PET18YCR020C 648 nt9.84□□□□□ -0.83
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms