Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Abca1P41233 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abca1P41233 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abca1P41233 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Abca1P41233 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Abca1P41233 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Abca1P41233 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.07■□□□□ 0.8
Abca1P41233 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.07■□□□□ 0.8
Abca1P41233 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Abca1P41233 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abca1P41233 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Abca1P41233 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Abca1P41233 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Abca1P41233 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Abca1P41233 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Abca1P41233 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Abca1P41233 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Abca1P41233 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Abca1P41233 Cap2-205ENSMUST00000225824 1634 ntBASIC20.02■□□□□ 0.8
Abca1P41233 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.01■□□□□ 0.79
Abca1P41233 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Abca1P41233 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.01■□□□□ 0.79
Abca1P41233 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Abca1P41233 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20■□□□□ 0.79
Abca1P41233 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20■□□□□ 0.79
Abca1P41233 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Abca1P41233 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Abca1P41233 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Abca1P41233 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Abca1P41233 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.97■□□□□ 0.79
Abca1P41233 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
Abca1P41233 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abca1P41233 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Abca1P41233 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Abca1P41233 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.96■□□□□ 0.79
Abca1P41233 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Abca1P41233 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.95■□□□□ 0.78
Abca1P41233 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.95■□□□□ 0.78
Abca1P41233 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abca1P41233 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Abca1P41233 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.92■□□□□ 0.78
Abca1P41233 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.92■□□□□ 0.78
Abca1P41233 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abca1P41233 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Abca1P41233 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Abca1P41233 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Abca1P41233 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.9■□□□□ 0.78
Abca1P41233 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Abca1P41233 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abca1P41233 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Abca1P41233 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Abca1P41233 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Abca1P41233 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Abca1P41233 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
Abca1P41233 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.88■□□□□ 0.77
Abca1P41233 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Abca1P41233 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abca1P41233 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.87■□□□□ 0.77
Abca1P41233 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.87■□□□□ 0.77
Abca1P41233 Gm6311-201ENSMUST00000073790 878 ntBASIC19.87■□□□□ 0.77
Abca1P41233 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Abca1P41233 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Abca1P41233 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Abca1P41233 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abca1P41233 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Abca1P41233 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Abca1P41233 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Abca1P41233 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.83■□□□□ 0.76
Abca1P41233 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Abca1P41233 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Abca1P41233 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abca1P41233 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abca1P41233 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abca1P41233 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.81■□□□□ 0.76
Abca1P41233 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.79■□□□□ 0.76
Abca1P41233 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Abca1P41233 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Abca1P41233 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abca1P41233 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.79■□□□□ 0.76
Abca1P41233 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Abca1P41233 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abca1P41233 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abca1P41233 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.77■□□□□ 0.76
Abca1P41233 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Abca1P41233 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.77■□□□□ 0.75
Abca1P41233 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abca1P41233 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abca1P41233 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.75■□□□□ 0.75
Abca1P41233 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.74■□□□□ 0.75
Abca1P41233 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abca1P41233 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abca1P41233 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Abca1P41233 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Abca1P41233 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abca1P41233 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Abca1P41233 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abca1P41233 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Abca1P41233 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.71■□□□□ 0.75
Abca1P41233 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Abca1P41233 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms