Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Ccl3P10855 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ccl3P10855 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ccl3P10855 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.03■■□□□ 1.12
Ccl3P10855 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.03■■□□□ 1.12
Ccl3P10855 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ccl3P10855 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ccl3P10855 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ccl3P10855 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.02■■□□□ 1.12
Ccl3P10855 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ccl3P10855 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ccl3P10855 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Ccl3P10855 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ccl3P10855 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22■■□□□ 1.11
Ccl3P10855 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.99■■□□□ 1.11
Ccl3P10855 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Ccl3P10855 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccl3P10855 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ccl3P10855 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ccl3P10855 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.97■■□□□ 1.11
Ccl3P10855 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ccl3P10855 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ccl3P10855 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ccl3P10855 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ccl3P10855 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ccl3P10855 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ccl3P10855 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccl3P10855 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.93■■□□□ 1.1
Ccl3P10855 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ccl3P10855 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.92■■□□□ 1.1
Ccl3P10855 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ccl3P10855 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
Ccl3P10855 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ccl3P10855 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ccl3P10855 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ccl3P10855 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.9■■□□□ 1.1
Ccl3P10855 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Ccl3P10855 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.89■■□□□ 1.09
Ccl3P10855 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ccl3P10855 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ccl3P10855 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ccl3P10855 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ccl3P10855 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.88■■□□□ 1.09
Ccl3P10855 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Ccl3P10855 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ccl3P10855 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.87■■□□□ 1.09
Ccl3P10855 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.86■■□□□ 1.09
Ccl3P10855 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ccl3P10855 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccl3P10855 Gm11175-201ENSMUST00000116172 543 ntBASIC21.85■■□□□ 1.09
Ccl3P10855 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.85■■□□□ 1.09
Ccl3P10855 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ccl3P10855 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Ccl3P10855 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ccl3P10855 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.84■■□□□ 1.09
Ccl3P10855 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccl3P10855 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ccl3P10855 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Ccl3P10855 Mir6538-201ENSMUST00000183713 110 ntBASIC21.83■■□□□ 1.09
Ccl3P10855 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
Ccl3P10855 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccl3P10855 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccl3P10855 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccl3P10855 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccl3P10855 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
Ccl3P10855 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ccl3P10855 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ccl3P10855 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccl3P10855 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.79■■□□□ 1.08
Ccl3P10855 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ccl3P10855 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccl3P10855 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccl3P10855 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccl3P10855 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Ccl3P10855 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccl3P10855 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Ccl3P10855 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccl3P10855 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccl3P10855 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccl3P10855 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ccl3P10855 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.74■■□□□ 1.07
Ccl3P10855 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccl3P10855 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccl3P10855 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccl3P10855 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccl3P10855 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.72■■□□□ 1.07
Ccl3P10855 Gm30023-201ENSMUST00000197970 889 ntBASIC21.72■■□□□ 1.07
Ccl3P10855 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ccl3P10855 Gm6311-201ENSMUST00000073790 878 ntBASIC21.7■■□□□ 1.06
Ccl3P10855 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccl3P10855 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccl3P10855 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.69■■□□□ 1.06
Ccl3P10855 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Ccl3P10855 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ccl3P10855 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ccl3P10855 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ccl3P10855 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ccl3P10855 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ccl3P10855 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccl3P10855 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms