Protein–RNA interactions for Protein: P04944

Ig kappa chain V-VI region NQ5-78.2.6, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04944 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
P04944 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
P04944 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
P04944 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P04944 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
P04944 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19■□□□□ 0.63
P04944 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
P04944 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P04944 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P04944 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.98■□□□□ 0.63
P04944 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.98■□□□□ 0.63
P04944 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
P04944 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P04944 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P04944 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
P04944 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
P04944 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04944 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04944 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
P04944 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04944 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
P04944 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04944 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
P04944 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04944 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P04944 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P04944 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04944 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04944 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
P04944 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04944 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04944 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P04944 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.86■□□□□ 0.61
P04944 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
P04944 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
P04944 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04944 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.84■□□□□ 0.61
P04944 Zfp131-205ENSMUST00000223812 663 ntBASIC18.84■□□□□ 0.61
P04944 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P04944 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04944 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04944 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
P04944 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04944 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04944 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.82■□□□□ 0.6
P04944 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04944 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04944 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P04944 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
P04944 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.81■□□□□ 0.6
P04944 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
P04944 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.8■□□□□ 0.6
P04944 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P04944 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
P04944 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P04944 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P04944 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
P04944 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.79■□□□□ 0.6
P04944 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
P04944 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
P04944 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
P04944 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04944 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
P04944 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P04944 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.76■□□□□ 0.59
P04944 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.76■□□□□ 0.59
P04944 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.76■□□□□ 0.59
P04944 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04944 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P04944 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
P04944 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04944 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
P04944 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04944 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
P04944 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
P04944 Gm9397-201ENSMUST00000200125 605 ntBASIC18.73■□□□□ 0.59
P04944 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
P04944 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
P04944 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04944 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.71■□□□□ 0.59
P04944 Gm24970-201ENSMUST00000175582 82 ntBASIC18.71■□□□□ 0.59
P04944 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.71■□□□□ 0.59
P04944 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.71■□□□□ 0.59
P04944 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
P04944 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P04944 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04944 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04944 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
P04944 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P04944 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
P04944 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.69■□□□□ 0.58
P04944 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04944 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04944 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04944 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
P04944 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04944 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.67■□□□□ 0.58
P04944 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04944 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.67■□□□□ 0.58
P04944 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 142 ms