Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
P01734 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
P01734 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
P01734 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
P01734 Gm9939-201ENSMUST00000067161 1154 ntBASIC26.71■■□□□ 1.87
P01734 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
P01734 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.7■■□□□ 1.86
P01734 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
P01734 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
P01734 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
P01734 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
P01734 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.68■■□□□ 1.86
P01734 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
P01734 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
P01734 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
P01734 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
P01734 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
P01734 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
P01734 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
P01734 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
P01734 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
P01734 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
P01734 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
P01734 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.63■■□□□ 1.85
P01734 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
P01734 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
P01734 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
P01734 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
P01734 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
P01734 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
P01734 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
P01734 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
P01734 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
P01734 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
P01734 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
P01734 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
P01734 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
P01734 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.58■■□□□ 1.84
P01734 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.57■■□□□ 1.84
P01734 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.57■■□□□ 1.84
P01734 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
P01734 Gm42809-201ENSMUST00000198429 1138 ntBASIC26.56■■□□□ 1.84
P01734 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
P01734 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.55■■□□□ 1.84
P01734 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
P01734 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
P01734 Gm6821-201ENSMUST00000107540 542 ntBASIC26.55■■□□□ 1.84
P01734 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
P01734 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
P01734 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
P01734 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
P01734 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
P01734 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
P01734 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
P01734 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
P01734 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
P01734 Nkain2-201ENSMUST00000092602 558 ntBASIC26.52■■□□□ 1.84
P01734 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
P01734 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
P01734 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
P01734 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
P01734 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
P01734 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.49■■□□□ 1.83
P01734 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
P01734 Gm8503-201ENSMUST00000118131 455 ntBASIC26.48■■□□□ 1.83
P01734 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
P01734 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
P01734 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
P01734 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
P01734 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.46■■□□□ 1.83
P01734 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
P01734 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
P01734 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
P01734 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
P01734 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC26.44■■□□□ 1.82
P01734 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
P01734 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.44■■□□□ 1.82
P01734 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
P01734 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
P01734 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.41■■□□□ 1.82
P01734 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.4■■□□□ 1.82
P01734 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.4■■□□□ 1.82
P01734 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.39■■□□□ 1.82
P01734 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
P01734 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.38■■□□□ 1.81
P01734 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
P01734 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
P01734 Amer2-203ENSMUST00000225247 2662 ntBASIC26.36■■□□□ 1.81
P01734 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
P01734 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
P01734 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.36■■□□□ 1.81
P01734 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
P01734 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.34■■□□□ 1.81
P01734 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
P01734 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
P01734 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.31■■□□□ 1.8
P01734 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
P01734 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.28■■□□□ 1.8
P01734 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
P01734 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.28■■□□□ 1.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms