Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SgceO70258 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SgceO70258 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SgceO70258 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SgceO70258 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SgceO70258 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.53■■□□□ 1.04
SgceO70258 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SgceO70258 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.53■■□□□ 1.04
SgceO70258 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SgceO70258 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SgceO70258 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.52■■□□□ 1.04
SgceO70258 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SgceO70258 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
SgceO70258 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SgceO70258 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SgceO70258 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SgceO70258 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SgceO70258 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SgceO70258 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SgceO70258 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.49■■□□□ 1.03
SgceO70258 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SgceO70258 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SgceO70258 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SgceO70258 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.48■■□□□ 1.03
SgceO70258 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SgceO70258 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SgceO70258 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SgceO70258 Gm45855-201ENSMUST00000212546 880 ntBASIC21.47■■□□□ 1.03
SgceO70258 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SgceO70258 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SgceO70258 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SgceO70258 Gm24970-201ENSMUST00000175582 82 ntBASIC21.46■■□□□ 1.03
SgceO70258 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SgceO70258 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SgceO70258 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.45■■□□□ 1.02
SgceO70258 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.45■■□□□ 1.02
SgceO70258 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SgceO70258 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SgceO70258 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SgceO70258 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SgceO70258 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.43■■□□□ 1.02
SgceO70258 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SgceO70258 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SgceO70258 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SgceO70258 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SgceO70258 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.41■■□□□ 1.02
SgceO70258 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SgceO70258 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.4■■□□□ 1.02
SgceO70258 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SgceO70258 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SgceO70258 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SgceO70258 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.37■■□□□ 1.01
SgceO70258 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SgceO70258 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.36■■□□□ 1.01
SgceO70258 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SgceO70258 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SgceO70258 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SgceO70258 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SgceO70258 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SgceO70258 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
SgceO70258 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SgceO70258 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.33■■□□□ 1.01
SgceO70258 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SgceO70258 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SgceO70258 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SgceO70258 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SgceO70258 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
SgceO70258 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.3■■□□□ 1
SgceO70258 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SgceO70258 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SgceO70258 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.29■■□□□ 1
SgceO70258 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
SgceO70258 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.29■■□□□ 1
SgceO70258 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SgceO70258 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SgceO70258 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SgceO70258 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SgceO70258 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SgceO70258 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SgceO70258 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SgceO70258 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SgceO70258 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SgceO70258 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SgceO70258 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.25■□□□□ 0.99
SgceO70258 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SgceO70258 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SgceO70258 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
SgceO70258 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SgceO70258 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SgceO70258 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SgceO70258 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SgceO70258 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SgceO70258 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SgceO70258 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SgceO70258 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.22■□□□□ 0.99
SgceO70258 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SgceO70258 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SgceO70258 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SgceO70258 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SgceO70258 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms