Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC32.42■■■□□ 2.78
Col15a1O35206 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Col15a1O35206 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Col15a1O35206 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Col15a1O35206 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Col15a1O35206 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Col15a1O35206 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
Col15a1O35206 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC32.35■■■□□ 2.77
Col15a1O35206 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC32.35■■■□□ 2.77
Col15a1O35206 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC32.33■■■□□ 2.77
Col15a1O35206 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
Col15a1O35206 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC32.31■■■□□ 2.76
Col15a1O35206 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Col15a1O35206 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Col15a1O35206 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
Col15a1O35206 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Col15a1O35206 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC32.27■■■□□ 2.76
Col15a1O35206 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC32.27■■■□□ 2.76
Col15a1O35206 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
Col15a1O35206 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Col15a1O35206 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC32.24■■■□□ 2.75
Col15a1O35206 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
Col15a1O35206 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Col15a1O35206 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Col15a1O35206 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC32.24■■■□□ 2.75
Col15a1O35206 Gm11175-201ENSMUST00000116172 543 ntBASIC32.23■■■□□ 2.75
Col15a1O35206 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Col15a1O35206 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Col15a1O35206 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Col15a1O35206 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC32.2■■■□□ 2.75
Col15a1O35206 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Col15a1O35206 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Col15a1O35206 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Col15a1O35206 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Col15a1O35206 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Col15a1O35206 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Col15a1O35206 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Col15a1O35206 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Col15a1O35206 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Col15a1O35206 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Col15a1O35206 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
Col15a1O35206 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC32.16■■■□□ 2.74
Col15a1O35206 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC32.14■■■□□ 2.74
Col15a1O35206 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Col15a1O35206 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Col15a1O35206 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
Col15a1O35206 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC32.13■■■□□ 2.73
Col15a1O35206 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC32.13■■■□□ 2.73
Col15a1O35206 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
Col15a1O35206 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Col15a1O35206 Gm6345-201ENSMUST00000180378 1691 ntBASIC32.12■■■□□ 2.73
Col15a1O35206 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
Col15a1O35206 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Col15a1O35206 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC32.1■■■□□ 2.73
Col15a1O35206 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC32.1■■■□□ 2.73
Col15a1O35206 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Col15a1O35206 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Col15a1O35206 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Col15a1O35206 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32.06■■■□□ 2.72
Col15a1O35206 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Col15a1O35206 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
Col15a1O35206 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC32.05■■■□□ 2.72
Col15a1O35206 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC32.04■■■□□ 2.72
Col15a1O35206 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Col15a1O35206 Mir6538-201ENSMUST00000183713 110 ntBASIC32.04■■■□□ 2.72
Col15a1O35206 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Col15a1O35206 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.72
Col15a1O35206 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
Col15a1O35206 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC32■■■□□ 2.71
Col15a1O35206 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
Col15a1O35206 AC131739.1-201ENSMUST00000221692 1245 ntBASIC31.99■■■□□ 2.71
Col15a1O35206 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
Col15a1O35206 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Col15a1O35206 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Col15a1O35206 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Col15a1O35206 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.94■■■□□ 2.7
Col15a1O35206 Gm30023-201ENSMUST00000197970 889 ntBASIC31.94■■■□□ 2.7
Col15a1O35206 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Col15a1O35206 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
Col15a1O35206 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Col15a1O35206 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Col15a1O35206 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Col15a1O35206 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Col15a1O35206 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
Col15a1O35206 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Col15a1O35206 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Col15a1O35206 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Col15a1O35206 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
Col15a1O35206 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC31.85■■■□□ 2.69
Col15a1O35206 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Col15a1O35206 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Col15a1O35206 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Col15a1O35206 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC31.83■■■□□ 2.69
Col15a1O35206 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
Col15a1O35206 Cap2-205ENSMUST00000225824 1634 ntBASIC31.83■■■□□ 2.69
Col15a1O35206 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Col15a1O35206 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Col15a1O35206 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Col15a1O35206 AC167019.3-201ENSMUST00000228225 1266 ntBASIC31.81■■■□□ 2.68
Col15a1O35206 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms