Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Gm3139J3QK78 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.52■■□□□ 1.52
Gm3139J3QK78 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Gm3139J3QK78 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
Gm3139J3QK78 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Gm3139J3QK78 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Gm3139J3QK78 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Gm3139J3QK78 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Gm3139J3QK78 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Gm3139J3QK78 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Gm3139J3QK78 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Gm3139J3QK78 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Gm3139J3QK78 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Gm3139J3QK78 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Gm3139J3QK78 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Gm3139J3QK78 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Gm3139J3QK78 Gm6821-201ENSMUST00000107540 542 ntBASIC24.45■■□□□ 1.5
Gm3139J3QK78 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.45■■□□□ 1.5
Gm3139J3QK78 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Gm3139J3QK78 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Gm3139J3QK78 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Gm3139J3QK78 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.44■■□□□ 1.5
Gm3139J3QK78 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.44■■□□□ 1.5
Gm3139J3QK78 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Gm3139J3QK78 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Gm3139J3QK78 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Gm3139J3QK78 Gm8503-201ENSMUST00000118131 455 ntBASIC24.42■■□□□ 1.5
Gm3139J3QK78 Nkain2-201ENSMUST00000092602 558 ntBASIC24.42■■□□□ 1.5
Gm3139J3QK78 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.41■■□□□ 1.5
Gm3139J3QK78 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Gm3139J3QK78 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Gm3139J3QK78 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Gm3139J3QK78 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Gm3139J3QK78 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.39■■□□□ 1.49
Gm3139J3QK78 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
Gm3139J3QK78 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
Gm3139J3QK78 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Gm3139J3QK78 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Gm3139J3QK78 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Gm3139J3QK78 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.36■■□□□ 1.49
Gm3139J3QK78 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Gm3139J3QK78 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Gm3139J3QK78 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Gm3139J3QK78 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.35■■□□□ 1.49
Gm3139J3QK78 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Gm3139J3QK78 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
Gm3139J3QK78 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm3139J3QK78 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Gm3139J3QK78 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Gm3139J3QK78 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.33■■□□□ 1.49
Gm3139J3QK78 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Gm3139J3QK78 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Gm3139J3QK78 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Gm3139J3QK78 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Gm3139J3QK78 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Gm3139J3QK78 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Gm3139J3QK78 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Gm3139J3QK78 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.31■■□□□ 1.48
Gm3139J3QK78 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.3■■□□□ 1.48
Gm3139J3QK78 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Gm3139J3QK78 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Gm3139J3QK78 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.28■■□□□ 1.48
Gm3139J3QK78 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Gm3139J3QK78 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Gm3139J3QK78 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Gm3139J3QK78 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.27■■□□□ 1.48
Gm3139J3QK78 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.27■■□□□ 1.48
Gm3139J3QK78 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Gm3139J3QK78 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Gm3139J3QK78 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.26■■□□□ 1.47
Gm3139J3QK78 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.24■■□□□ 1.47
Gm3139J3QK78 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Gm3139J3QK78 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Gm3139J3QK78 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.24■■□□□ 1.47
Gm3139J3QK78 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Gm3139J3QK78 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Gm3139J3QK78 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Gm3139J3QK78 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Gm3139J3QK78 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Gm3139J3QK78 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Gm3139J3QK78 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Gm3139J3QK78 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Gm3139J3QK78 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.21■■□□□ 1.47
Gm3139J3QK78 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.21■■□□□ 1.47
Gm3139J3QK78 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24.21■■□□□ 1.47
Gm3139J3QK78 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Gm3139J3QK78 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.2■■□□□ 1.46
Gm3139J3QK78 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Gm3139J3QK78 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Gm3139J3QK78 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Gm3139J3QK78 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Gm3139J3QK78 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Gm3139J3QK78 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
Gm3139J3QK78 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Gm3139J3QK78 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Gm3139J3QK78 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Gm3139J3QK78 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Gm3139J3QK78 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Gm3139J3QK78 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.14■■□□□ 1.45
Gm3139J3QK78 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms