Protein–RNA interactions for Protein: E9PYU5

Gm44503, Predicted readthrough transcript (NMD candidate), 44503, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm44503E9PYU5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Gm44503E9PYU5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.45■■■□□ 2.15
Gm44503E9PYU5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.45■■■□□ 2.14
Gm44503E9PYU5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Gm44503E9PYU5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
Gm44503E9PYU5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.43■■■□□ 2.14
Gm44503E9PYU5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Gm44503E9PYU5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.42■■■□□ 2.14
Gm44503E9PYU5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Gm44503E9PYU5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Gm44503E9PYU5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.4■■■□□ 2.14
Gm44503E9PYU5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.39■■■□□ 2.14
Gm44503E9PYU5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.39■■■□□ 2.14
Gm44503E9PYU5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Gm44503E9PYU5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.38■■■□□ 2.13
Gm44503E9PYU5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Gm44503E9PYU5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Gm44503E9PYU5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Gm44503E9PYU5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Gm44503E9PYU5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Gm44503E9PYU5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
Gm44503E9PYU5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Gm44503E9PYU5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Gm44503E9PYU5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Gm44503E9PYU5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.29■■■□□ 2.12
Gm44503E9PYU5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.29■■■□□ 2.12
Gm44503E9PYU5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Gm44503E9PYU5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Gm44503E9PYU5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Gm44503E9PYU5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Gm44503E9PYU5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
Gm44503E9PYU5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.26■■■□□ 2.11
Gm44503E9PYU5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.26■■■□□ 2.11
Gm44503E9PYU5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.25■■■□□ 2.11
Gm44503E9PYU5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.25■■■□□ 2.11
Gm44503E9PYU5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Gm44503E9PYU5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Gm44503E9PYU5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Gm44503E9PYU5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Gm44503E9PYU5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Gm44503E9PYU5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Gm44503E9PYU5 Gm11175-201ENSMUST00000116172 543 ntBASIC28.22■■■□□ 2.11
Gm44503E9PYU5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Gm44503E9PYU5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Gm44503E9PYU5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.21■■■□□ 2.11
Gm44503E9PYU5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
Gm44503E9PYU5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.2■■■□□ 2.1
Gm44503E9PYU5 Mir6538-201ENSMUST00000183713 110 ntBASIC28.19■■■□□ 2.1
Gm44503E9PYU5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Gm44503E9PYU5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Gm44503E9PYU5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Gm44503E9PYU5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.17■■■□□ 2.1
Gm44503E9PYU5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Gm44503E9PYU5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
Gm44503E9PYU5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Gm44503E9PYU5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Gm44503E9PYU5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Gm44503E9PYU5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
Gm44503E9PYU5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Gm44503E9PYU5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Gm44503E9PYU5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Gm44503E9PYU5 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.12■■■□□ 2.09
Gm44503E9PYU5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
Gm44503E9PYU5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Gm44503E9PYU5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Gm44503E9PYU5 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Gm44503E9PYU5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Gm44503E9PYU5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.09■■■□□ 2.09
Gm44503E9PYU5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Gm44503E9PYU5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Gm44503E9PYU5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Gm44503E9PYU5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Gm44503E9PYU5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Gm44503E9PYU5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Gm44503E9PYU5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Gm44503E9PYU5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Gm44503E9PYU5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Gm44503E9PYU5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.04■■■□□ 2.08
Gm44503E9PYU5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Gm44503E9PYU5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Gm44503E9PYU5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.02■■■□□ 2.08
Gm44503E9PYU5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28■■■□□ 2.07
Gm44503E9PYU5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28■■■□□ 2.07
Gm44503E9PYU5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Gm44503E9PYU5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
Gm44503E9PYU5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
Gm44503E9PYU5 Gm30023-201ENSMUST00000197970 889 ntBASIC27.99■■■□□ 2.07
Gm44503E9PYU5 Gm6311-201ENSMUST00000073790 878 ntBASIC27.99■■■□□ 2.07
Gm44503E9PYU5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.98■■■□□ 2.07
Gm44503E9PYU5 Cap2-205ENSMUST00000225824 1634 ntBASIC27.98■■■□□ 2.07
Gm44503E9PYU5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Gm44503E9PYU5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Gm44503E9PYU5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
Gm44503E9PYU5 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.96■■■□□ 2.07
Gm44503E9PYU5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Gm44503E9PYU5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
Gm44503E9PYU5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Gm44503E9PYU5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Gm44503E9PYU5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.92■■■□□ 2.06
Gm44503E9PYU5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms