Protein–RNA interactions for Protein: D3YYI8

Gm10093, Histone deacetylase, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10093D3YYI8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
Gm10093D3YYI8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Gm10093D3YYI8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Gm10093D3YYI8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Gm10093D3YYI8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Gm10093D3YYI8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Gm10093D3YYI8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
Gm10093D3YYI8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
Gm10093D3YYI8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Gm10093D3YYI8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Gm10093D3YYI8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Gm10093D3YYI8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Gm10093D3YYI8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Gm10093D3YYI8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Gm10093D3YYI8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Gm10093D3YYI8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Gm10093D3YYI8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Gm10093D3YYI8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Gm10093D3YYI8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Gm10093D3YYI8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Gm10093D3YYI8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Gm10093D3YYI8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC29.15■■■□□ 2.26
Gm10093D3YYI8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Gm10093D3YYI8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
Gm10093D3YYI8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.14■■■□□ 2.26
Gm10093D3YYI8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Gm10093D3YYI8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Gm10093D3YYI8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC29.13■■■□□ 2.25
Gm10093D3YYI8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
Gm10093D3YYI8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Gm10093D3YYI8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Gm10093D3YYI8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC29.12■■■□□ 2.25
Gm10093D3YYI8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Gm10093D3YYI8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC29.1■■■□□ 2.25
Gm10093D3YYI8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Gm10093D3YYI8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Gm10093D3YYI8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Gm10093D3YYI8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Gm10093D3YYI8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Gm10093D3YYI8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Gm10093D3YYI8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Gm10093D3YYI8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Gm10093D3YYI8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.06■■■□□ 2.24
Gm10093D3YYI8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Gm10093D3YYI8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Gm10093D3YYI8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Gm10093D3YYI8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Gm10093D3YYI8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Gm10093D3YYI8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Gm10093D3YYI8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Gm10093D3YYI8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Gm10093D3YYI8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
Gm10093D3YYI8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Gm10093D3YYI8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Gm10093D3YYI8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Gm10093D3YYI8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.01■■■□□ 2.24
Gm10093D3YYI8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC29■■■□□ 2.23
Gm10093D3YYI8 Gm24804-201ENSMUST00000174982 85 ntBASIC29■■■□□ 2.23
Gm10093D3YYI8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Gm10093D3YYI8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Gm10093D3YYI8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.99■■■□□ 2.23
Gm10093D3YYI8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.98■■■□□ 2.23
Gm10093D3YYI8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
Gm10093D3YYI8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Gm10093D3YYI8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Gm10093D3YYI8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Gm10093D3YYI8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC28.93■■■□□ 2.22
Gm10093D3YYI8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Gm10093D3YYI8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Gm10093D3YYI8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Gm10093D3YYI8 Gm16148-201ENSMUST00000119653 893 ntBASIC28.89■■■□□ 2.22
Gm10093D3YYI8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Gm10093D3YYI8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Gm10093D3YYI8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Gm10093D3YYI8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Gm10093D3YYI8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Gm10093D3YYI8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.85■■■□□ 2.21
Gm10093D3YYI8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Gm10093D3YYI8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Gm10093D3YYI8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.83■■■□□ 2.2
Gm10093D3YYI8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Gm10093D3YYI8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Gm10093D3YYI8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Gm10093D3YYI8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
Gm10093D3YYI8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC28.8■■■□□ 2.2
Gm10093D3YYI8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Gm10093D3YYI8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Gm10093D3YYI8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Gm10093D3YYI8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Gm10093D3YYI8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Gm10093D3YYI8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Gm10093D3YYI8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Gm10093D3YYI8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Gm10093D3YYI8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
Gm10093D3YYI8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
Gm10093D3YYI8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Gm10093D3YYI8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Gm10093D3YYI8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Gm10093D3YYI8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
Gm10093D3YYI8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms