Protein–RNA interactions for Protein: D3YYI8

Gm10093, Histone deacetylase, mousemouse

Predictions only

Length 482 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10093D3YYI8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
Gm10093D3YYI8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Gm10093D3YYI8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Gm10093D3YYI8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Gm10093D3YYI8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Gm10093D3YYI8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Gm10093D3YYI8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.26
Gm10093D3YYI8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
Gm10093D3YYI8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Gm10093D3YYI8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Gm10093D3YYI8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Gm10093D3YYI8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Gm10093D3YYI8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Gm10093D3YYI8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Gm10093D3YYI8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Gm10093D3YYI8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Gm10093D3YYI8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Gm10093D3YYI8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Gm10093D3YYI8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Gm10093D3YYI8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Gm10093D3YYI8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Gm10093D3YYI8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC29.15■■■□□ 2.26
Gm10093D3YYI8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Gm10093D3YYI8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
Gm10093D3YYI8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.14■■■□□ 2.26
Gm10093D3YYI8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Gm10093D3YYI8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Gm10093D3YYI8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC29.13■■■□□ 2.25
Gm10093D3YYI8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
Gm10093D3YYI8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Gm10093D3YYI8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Gm10093D3YYI8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC29.12■■■□□ 2.25
Gm10093D3YYI8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Gm10093D3YYI8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC29.1■■■□□ 2.25
Gm10093D3YYI8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Gm10093D3YYI8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Gm10093D3YYI8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Gm10093D3YYI8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Gm10093D3YYI8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Gm10093D3YYI8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Gm10093D3YYI8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Gm10093D3YYI8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Gm10093D3YYI8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC29.06■■■□□ 2.24
Gm10093D3YYI8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Gm10093D3YYI8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Gm10093D3YYI8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Gm10093D3YYI8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Gm10093D3YYI8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Gm10093D3YYI8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Gm10093D3YYI8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
Gm10093D3YYI8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Gm10093D3YYI8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
Gm10093D3YYI8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Gm10093D3YYI8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Gm10093D3YYI8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Gm10093D3YYI8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC29.01■■■□□ 2.24
Gm10093D3YYI8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC29■■■□□ 2.23
Gm10093D3YYI8 Gm24804-201ENSMUST00000174982 85 ntBASIC29■■■□□ 2.23
Gm10093D3YYI8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Gm10093D3YYI8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Gm10093D3YYI8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC28.99■■■□□ 2.23
Gm10093D3YYI8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.98■■■□□ 2.23
Gm10093D3YYI8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
Gm10093D3YYI8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Gm10093D3YYI8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Gm10093D3YYI8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Gm10093D3YYI8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC28.93■■■□□ 2.22
Gm10093D3YYI8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Gm10093D3YYI8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Gm10093D3YYI8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Gm10093D3YYI8 Gm16148-201ENSMUST00000119653 893 ntBASIC28.89■■■□□ 2.22
Gm10093D3YYI8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Gm10093D3YYI8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Gm10093D3YYI8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Gm10093D3YYI8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Gm10093D3YYI8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Gm10093D3YYI8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC28.85■■■□□ 2.21
Gm10093D3YYI8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Gm10093D3YYI8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Gm10093D3YYI8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.83■■■□□ 2.2
Gm10093D3YYI8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Gm10093D3YYI8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Gm10093D3YYI8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Gm10093D3YYI8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC28.81■■■□□ 2.2
Gm10093D3YYI8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC28.8■■■□□ 2.2
Gm10093D3YYI8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Gm10093D3YYI8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Gm10093D3YYI8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Gm10093D3YYI8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Gm10093D3YYI8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Gm10093D3YYI8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Gm10093D3YYI8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Gm10093D3YYI8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Gm10093D3YYI8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.77■■■□□ 2.2
Gm10093D3YYI8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
Gm10093D3YYI8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Gm10093D3YYI8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Gm10093D3YYI8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Gm10093D3YYI8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
Gm10093D3YYI8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms