Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26.67■■□□□ 1.86
Ttc38A3KMP2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.66■■□□□ 1.86
Ttc38A3KMP2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC26.66■■□□□ 1.86
Ttc38A3KMP2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Ttc38A3KMP2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Ttc38A3KMP2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ttc38A3KMP2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ttc38A3KMP2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ttc38A3KMP2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Ttc38A3KMP2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Ttc38A3KMP2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Ttc38A3KMP2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Ttc38A3KMP2 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC26.63■■□□□ 1.85
Ttc38A3KMP2 Fezf2-202ENSMUST00000224023 1917 ntBASIC26.62■■□□□ 1.85
Ttc38A3KMP2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ttc38A3KMP2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.62■■□□□ 1.85
Ttc38A3KMP2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Ttc38A3KMP2 Gm24970-201ENSMUST00000175582 82 ntBASIC26.61■■□□□ 1.85
Ttc38A3KMP2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC26.6■■□□□ 1.85
Ttc38A3KMP2 Gm45855-201ENSMUST00000212546 880 ntBASIC26.6■■□□□ 1.85
Ttc38A3KMP2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ttc38A3KMP2 AC157572.2-201ENSMUST00000226970 908 ntBASIC26.59■■□□□ 1.85
Ttc38A3KMP2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Ttc38A3KMP2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC26.57■■□□□ 1.84
Ttc38A3KMP2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ttc38A3KMP2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC26.57■■□□□ 1.84
Ttc38A3KMP2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
Ttc38A3KMP2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ttc38A3KMP2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ttc38A3KMP2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ttc38A3KMP2 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.54■■□□□ 1.84
Ttc38A3KMP2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.54■■□□□ 1.84
Ttc38A3KMP2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ttc38A3KMP2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ttc38A3KMP2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ttc38A3KMP2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ttc38A3KMP2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
Ttc38A3KMP2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ttc38A3KMP2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ttc38A3KMP2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ttc38A3KMP2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ttc38A3KMP2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Ttc38A3KMP2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ttc38A3KMP2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Ttc38A3KMP2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
Ttc38A3KMP2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ttc38A3KMP2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Ttc38A3KMP2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ttc38A3KMP2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ttc38A3KMP2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ttc38A3KMP2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.43■■□□□ 1.82
Ttc38A3KMP2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ttc38A3KMP2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC26.41■■□□□ 1.82
Ttc38A3KMP2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ttc38A3KMP2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ttc38A3KMP2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.4■■□□□ 1.82
Ttc38A3KMP2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
Ttc38A3KMP2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ttc38A3KMP2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ttc38A3KMP2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ttc38A3KMP2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Ttc38A3KMP2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ttc38A3KMP2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Ttc38A3KMP2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Ttc38A3KMP2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.37■■□□□ 1.81
Ttc38A3KMP2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.37■■□□□ 1.81
Ttc38A3KMP2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
Ttc38A3KMP2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Ttc38A3KMP2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Ttc38A3KMP2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ttc38A3KMP2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ttc38A3KMP2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ttc38A3KMP2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Ttc38A3KMP2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ttc38A3KMP2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ttc38A3KMP2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Ttc38A3KMP2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC26.28■■□□□ 1.8
Ttc38A3KMP2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ttc38A3KMP2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Ttc38A3KMP2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Ttc38A3KMP2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Ttc38A3KMP2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ttc38A3KMP2 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Ttc38A3KMP2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Ttc38A3KMP2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Ttc38A3KMP2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ttc38A3KMP2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ttc38A3KMP2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Ttc38A3KMP2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC26.21■■□□□ 1.79
Ttc38A3KMP2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ttc38A3KMP2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ttc38A3KMP2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC26.2■■□□□ 1.78
Ttc38A3KMP2 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ttc38A3KMP2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Ttc38A3KMP2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Ttc38A3KMP2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ttc38A3KMP2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
Ttc38A3KMP2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.17■■□□□ 1.78
Ttc38A3KMP2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ttc38A3KMP2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms