Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trav15d-2-dv6d-2A0A0G2JGQ7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.33■■□□□ 1.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.32■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.32■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.31■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.27■■□□□ 1
Trav15d-2-dv6d-2A0A0G2JGQ7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Trav15d-2-dv6d-2A0A0G2JGQ7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav15d-2-dv6d-2A0A0G2JGQ7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav15d-2-dv6d-2A0A0G2JGQ7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trav15d-2-dv6d-2A0A0G2JGQ7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Trav15d-2-dv6d-2A0A0G2JGQ7 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trav15d-2-dv6d-2A0A0G2JGQ7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trav15d-2-dv6d-2A0A0G2JGQ7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.21■□□□□ 0.99
Trav15d-2-dv6d-2A0A0G2JGQ7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trav15d-2-dv6d-2A0A0G2JGQ7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.19■□□□□ 0.98
Trav15d-2-dv6d-2A0A0G2JGQ7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trav15d-2-dv6d-2A0A0G2JGQ7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trav15d-2-dv6d-2A0A0G2JGQ7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.18■□□□□ 0.98
Trav15d-2-dv6d-2A0A0G2JGQ7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.17■□□□□ 0.98
Trav15d-2-dv6d-2A0A0G2JGQ7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav15d-2-dv6d-2A0A0G2JGQ7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trav15d-2-dv6d-2A0A0G2JGQ7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trav15d-2-dv6d-2A0A0G2JGQ7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.11■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
Trav15d-2-dv6d-2A0A0G2JGQ7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.07■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.04■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trav15d-2-dv6d-2A0A0G2JGQ7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms