Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Tcrg-V3A0A0G2JEW2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Tcrg-V3A0A0G2JEW2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.78■■□□□ 1.4
Tcrg-V3A0A0G2JEW2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Tcrg-V3A0A0G2JEW2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Tcrg-V3A0A0G2JEW2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Tcrg-V3A0A0G2JEW2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.76■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.75■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.74■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Gm6821-201ENSMUST00000107540 542 ntBASIC23.74■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.74■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.73■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.72■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Gm8503-201ENSMUST00000118131 455 ntBASIC23.71■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Tcrg-V3A0A0G2JEW2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Nkain2-201ENSMUST00000092602 558 ntBASIC23.69■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.65■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Tcrg-V3A0A0G2JEW2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.62■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.61■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.61■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Tcrg-V3A0A0G2JEW2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.57■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.57■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.54■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.54■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.53■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tcrg-V3A0A0G2JEW2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Tcrg-V3A0A0G2JEW2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Tcrg-V3A0A0G2JEW2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Tcrg-V3A0A0G2JEW2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
Tcrg-V3A0A0G2JEW2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.5■■□□□ 1.35
Tcrg-V3A0A0G2JEW2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.5■■□□□ 1.35
Tcrg-V3A0A0G2JEW2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tcrg-V3A0A0G2JEW2 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.48■■□□□ 1.35
Tcrg-V3A0A0G2JEW2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Tcrg-V3A0A0G2JEW2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Tcrg-V3A0A0G2JEW2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.46■■□□□ 1.35
Tcrg-V3A0A0G2JEW2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Tcrg-V3A0A0G2JEW2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Tcrg-V3A0A0G2JEW2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Tcrg-V3A0A0G2JEW2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.43■■□□□ 1.34
Tcrg-V3A0A0G2JEW2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.42■■□□□ 1.34
Tcrg-V3A0A0G2JEW2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tcrg-V3A0A0G2JEW2 Gm30023-201ENSMUST00000197970 889 ntBASIC23.41■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms