Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-20A0A0A6YX66 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-20A0A0A6YX66 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ighv1-20A0A0A6YX66 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-20A0A0A6YX66 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ighv1-20A0A0A6YX66 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-20A0A0A6YX66 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ighv1-20A0A0A6YX66 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.73■□□□□ 0.75
Ighv1-20A0A0A6YX66 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-20A0A0A6YX66 Nkain2-201ENSMUST00000092602 558 ntBASIC19.72■□□□□ 0.75
Ighv1-20A0A0A6YX66 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ighv1-20A0A0A6YX66 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-20A0A0A6YX66 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ighv1-20A0A0A6YX66 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.71■□□□□ 0.75
Ighv1-20A0A0A6YX66 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ighv1-20A0A0A6YX66 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-20A0A0A6YX66 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-20A0A0A6YX66 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ighv1-20A0A0A6YX66 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.69■□□□□ 0.74
Ighv1-20A0A0A6YX66 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv1-20A0A0A6YX66 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ighv1-20A0A0A6YX66 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ighv1-20A0A0A6YX66 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ighv1-20A0A0A6YX66 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ighv1-20A0A0A6YX66 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv1-20A0A0A6YX66 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.66■□□□□ 0.74
Ighv1-20A0A0A6YX66 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Ighv1-20A0A0A6YX66 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv1-20A0A0A6YX66 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC19.66■□□□□ 0.74
Ighv1-20A0A0A6YX66 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ighv1-20A0A0A6YX66 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ighv1-20A0A0A6YX66 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv1-20A0A0A6YX66 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ighv1-20A0A0A6YX66 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-20A0A0A6YX66 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-20A0A0A6YX66 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-20A0A0A6YX66 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ighv1-20A0A0A6YX66 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.63■□□□□ 0.73
Ighv1-20A0A0A6YX66 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ighv1-20A0A0A6YX66 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ighv1-20A0A0A6YX66 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ighv1-20A0A0A6YX66 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ighv1-20A0A0A6YX66 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-20A0A0A6YX66 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-20A0A0A6YX66 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.59■□□□□ 0.73
Ighv1-20A0A0A6YX66 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-20A0A0A6YX66 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.59■□□□□ 0.73
Ighv1-20A0A0A6YX66 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Ighv1-20A0A0A6YX66 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ighv1-20A0A0A6YX66 Zxda-201ENSMUST00000117281 2621 ntBASIC19.58■□□□□ 0.73
Ighv1-20A0A0A6YX66 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ighv1-20A0A0A6YX66 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC19.57■□□□□ 0.72
Ighv1-20A0A0A6YX66 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-20A0A0A6YX66 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.57■□□□□ 0.72
Ighv1-20A0A0A6YX66 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-20A0A0A6YX66 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-20A0A0A6YX66 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ighv1-20A0A0A6YX66 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.56■□□□□ 0.72
Ighv1-20A0A0A6YX66 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ighv1-20A0A0A6YX66 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-20A0A0A6YX66 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ighv1-20A0A0A6YX66 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ighv1-20A0A0A6YX66 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ighv1-20A0A0A6YX66 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
Ighv1-20A0A0A6YX66 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ighv1-20A0A0A6YX66 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-20A0A0A6YX66 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-20A0A0A6YX66 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ighv1-20A0A0A6YX66 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ighv1-20A0A0A6YX66 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ighv1-20A0A0A6YX66 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.52■□□□□ 0.72
Ighv1-20A0A0A6YX66 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.52■□□□□ 0.72
Ighv1-20A0A0A6YX66 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ighv1-20A0A0A6YX66 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ighv1-20A0A0A6YX66 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.5■□□□□ 0.71
Ighv1-20A0A0A6YX66 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ighv1-20A0A0A6YX66 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ighv1-20A0A0A6YX66 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ighv1-20A0A0A6YX66 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Ighv1-20A0A0A6YX66 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-20A0A0A6YX66 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ighv1-20A0A0A6YX66 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ighv1-20A0A0A6YX66 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-20A0A0A6YX66 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ighv1-20A0A0A6YX66 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ighv1-20A0A0A6YX66 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.47■□□□□ 0.71
Ighv1-20A0A0A6YX66 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ighv1-20A0A0A6YX66 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ighv1-20A0A0A6YX66 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ighv1-20A0A0A6YX66 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ighv1-20A0A0A6YX66 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ighv1-20A0A0A6YX66 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.44■□□□□ 0.7
Ighv1-20A0A0A6YX66 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.44■□□□□ 0.7
Ighv1-20A0A0A6YX66 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.44■□□□□ 0.7
Ighv1-20A0A0A6YX66 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv1-20A0A0A6YX66 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ighv1-20A0A0A6YX66 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.43■□□□□ 0.7
Ighv1-20A0A0A6YX66 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ighv1-20A0A0A6YX66 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ighv1-20A0A0A6YX66 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms