Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav21-dv12A0A075B6C4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Trav21-dv12A0A075B6C4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav21-dv12A0A075B6C4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav21-dv12A0A075B6C4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav21-dv12A0A075B6C4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav21-dv12A0A075B6C4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav21-dv12A0A075B6C4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav21-dv12A0A075B6C4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.55■□□□□ 0.56
Trav21-dv12A0A075B6C4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav21-dv12A0A075B6C4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav21-dv12A0A075B6C4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav21-dv12A0A075B6C4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav21-dv12A0A075B6C4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Trav21-dv12A0A075B6C4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav21-dv12A0A075B6C4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav21-dv12A0A075B6C4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trav21-dv12A0A075B6C4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav21-dv12A0A075B6C4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trav21-dv12A0A075B6C4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav21-dv12A0A075B6C4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav21-dv12A0A075B6C4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav21-dv12A0A075B6C4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav21-dv12A0A075B6C4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav21-dv12A0A075B6C4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trav21-dv12A0A075B6C4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav21-dv12A0A075B6C4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Trav21-dv12A0A075B6C4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trav21-dv12A0A075B6C4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trav21-dv12A0A075B6C4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav21-dv12A0A075B6C4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav21-dv12A0A075B6C4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav21-dv12A0A075B6C4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trav21-dv12A0A075B6C4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trav21-dv12A0A075B6C4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.44■□□□□ 0.54
Trav21-dv12A0A075B6C4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav21-dv12A0A075B6C4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav21-dv12A0A075B6C4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.43■□□□□ 0.54
Trav21-dv12A0A075B6C4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav21-dv12A0A075B6C4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav21-dv12A0A075B6C4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav21-dv12A0A075B6C4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav21-dv12A0A075B6C4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav21-dv12A0A075B6C4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav21-dv12A0A075B6C4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav21-dv12A0A075B6C4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav21-dv12A0A075B6C4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Trav21-dv12A0A075B6C4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav21-dv12A0A075B6C4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
Trav21-dv12A0A075B6C4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav21-dv12A0A075B6C4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.38■□□□□ 0.53
Trav21-dv12A0A075B6C4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trav21-dv12A0A075B6C4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav21-dv12A0A075B6C4 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav21-dv12A0A075B6C4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav21-dv12A0A075B6C4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav21-dv12A0A075B6C4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trav21-dv12A0A075B6C4 Zfp131-205ENSMUST00000223812 663 ntBASIC18.36■□□□□ 0.53
Trav21-dv12A0A075B6C4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav21-dv12A0A075B6C4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav21-dv12A0A075B6C4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.35■□□□□ 0.53
Trav21-dv12A0A075B6C4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav21-dv12A0A075B6C4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav21-dv12A0A075B6C4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav21-dv12A0A075B6C4 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.34■□□□□ 0.53
Trav21-dv12A0A075B6C4 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.34■□□□□ 0.53
Trav21-dv12A0A075B6C4 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.33■□□□□ 0.52
Trav21-dv12A0A075B6C4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav21-dv12A0A075B6C4 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trav21-dv12A0A075B6C4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trav21-dv12A0A075B6C4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav21-dv12A0A075B6C4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav21-dv12A0A075B6C4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav21-dv12A0A075B6C4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.31■□□□□ 0.52
Trav21-dv12A0A075B6C4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav21-dv12A0A075B6C4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trav21-dv12A0A075B6C4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Trav21-dv12A0A075B6C4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
Trav21-dv12A0A075B6C4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trav21-dv12A0A075B6C4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.3■□□□□ 0.52
Trav21-dv12A0A075B6C4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav21-dv12A0A075B6C4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav21-dv12A0A075B6C4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav21-dv12A0A075B6C4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav21-dv12A0A075B6C4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav21-dv12A0A075B6C4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav21-dv12A0A075B6C4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Trav21-dv12A0A075B6C4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.28■□□□□ 0.52
Trav21-dv12A0A075B6C4 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.28■□□□□ 0.52
Trav21-dv12A0A075B6C4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trav21-dv12A0A075B6C4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.28■□□□□ 0.52
Trav21-dv12A0A075B6C4 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.27■□□□□ 0.52
Trav21-dv12A0A075B6C4 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.27■□□□□ 0.52
Trav21-dv12A0A075B6C4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Trav21-dv12A0A075B6C4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav21-dv12A0A075B6C4 Gm9397-201ENSMUST00000200125 605 ntBASIC18.26■□□□□ 0.51
Trav21-dv12A0A075B6C4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav21-dv12A0A075B6C4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trav21-dv12A0A075B6C4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.25■□□□□ 0.51
Trav21-dv12A0A075B6C4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 485 ms