Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav7n-5A0A075B604 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trav7n-5A0A075B604 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav7n-5A0A075B604 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav7n-5A0A075B604 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav7n-5A0A075B604 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav7n-5A0A075B604 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.05■□□□□ 0.8
Trav7n-5A0A075B604 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trav7n-5A0A075B604 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav7n-5A0A075B604 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav7n-5A0A075B604 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav7n-5A0A075B604 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav7n-5A0A075B604 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Trav7n-5A0A075B604 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav7n-5A0A075B604 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav7n-5A0A075B604 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav7n-5A0A075B604 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav7n-5A0A075B604 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav7n-5A0A075B604 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav7n-5A0A075B604 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav7n-5A0A075B604 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trav7n-5A0A075B604 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Trav7n-5A0A075B604 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav7n-5A0A075B604 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Trav7n-5A0A075B604 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.01■□□□□ 0.79
Trav7n-5A0A075B604 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav7n-5A0A075B604 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav7n-5A0A075B604 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.01■□□□□ 0.79
Trav7n-5A0A075B604 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav7n-5A0A075B604 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav7n-5A0A075B604 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav7n-5A0A075B604 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trav7n-5A0A075B604 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trav7n-5A0A075B604 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.97■□□□□ 0.79
Trav7n-5A0A075B604 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav7n-5A0A075B604 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav7n-5A0A075B604 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trav7n-5A0A075B604 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.96■□□□□ 0.79
Trav7n-5A0A075B604 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trav7n-5A0A075B604 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav7n-5A0A075B604 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav7n-5A0A075B604 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav7n-5A0A075B604 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav7n-5A0A075B604 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav7n-5A0A075B604 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trav7n-5A0A075B604 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Trav7n-5A0A075B604 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Trav7n-5A0A075B604 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trav7n-5A0A075B604 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav7n-5A0A075B604 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav7n-5A0A075B604 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav7n-5A0A075B604 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav7n-5A0A075B604 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav7n-5A0A075B604 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav7n-5A0A075B604 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Trav7n-5A0A075B604 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trav7n-5A0A075B604 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav7n-5A0A075B604 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav7n-5A0A075B604 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav7n-5A0A075B604 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav7n-5A0A075B604 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trav7n-5A0A075B604 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav7n-5A0A075B604 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Trav7n-5A0A075B604 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.87■□□□□ 0.77
Trav7n-5A0A075B604 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav7n-5A0A075B604 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Trav7n-5A0A075B604 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav7n-5A0A075B604 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav7n-5A0A075B604 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trav7n-5A0A075B604 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav7n-5A0A075B604 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Trav7n-5A0A075B604 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trav7n-5A0A075B604 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav7n-5A0A075B604 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
Trav7n-5A0A075B604 Nkain2-201ENSMUST00000092602 558 ntBASIC19.83■□□□□ 0.77
Trav7n-5A0A075B604 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
Trav7n-5A0A075B604 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trav7n-5A0A075B604 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.82■□□□□ 0.76
Trav7n-5A0A075B604 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.81■□□□□ 0.76
Trav7n-5A0A075B604 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav7n-5A0A075B604 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.8■□□□□ 0.76
Trav7n-5A0A075B604 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.8■□□□□ 0.76
Trav7n-5A0A075B604 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trav7n-5A0A075B604 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav7n-5A0A075B604 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.78■□□□□ 0.76
Trav7n-5A0A075B604 Gm6821-201ENSMUST00000107540 542 ntBASIC19.78■□□□□ 0.76
Trav7n-5A0A075B604 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Trav7n-5A0A075B604 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trav7n-5A0A075B604 Gm8503-201ENSMUST00000118131 455 ntBASIC19.75■□□□□ 0.75
Trav7n-5A0A075B604 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Trav7n-5A0A075B604 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav7n-5A0A075B604 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Trav7n-5A0A075B604 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav7n-5A0A075B604 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.74■□□□□ 0.75
Trav7n-5A0A075B604 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.73■□□□□ 0.75
Trav7n-5A0A075B604 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Trav7n-5A0A075B604 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav7n-5A0A075B604 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.72■□□□□ 0.75
Trav7n-5A0A075B604 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trav7n-5A0A075B604 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms