Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trav9-1A0A075B601 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.89■□□□□ 0.61
Trav9-1A0A075B601 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trav9-1A0A075B601 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav9-1A0A075B601 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trav9-1A0A075B601 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav9-1A0A075B601 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav9-1A0A075B601 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trav9-1A0A075B601 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trav9-1A0A075B601 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trav9-1A0A075B601 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav9-1A0A075B601 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trav9-1A0A075B601 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav9-1A0A075B601 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav9-1A0A075B601 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trav9-1A0A075B601 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav9-1A0A075B601 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav9-1A0A075B601 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav9-1A0A075B601 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav9-1A0A075B601 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav9-1A0A075B601 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav9-1A0A075B601 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav9-1A0A075B601 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Trav9-1A0A075B601 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav9-1A0A075B601 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav9-1A0A075B601 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav9-1A0A075B601 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav9-1A0A075B601 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav9-1A0A075B601 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.8■□□□□ 0.6
Trav9-1A0A075B601 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trav9-1A0A075B601 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav9-1A0A075B601 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav9-1A0A075B601 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav9-1A0A075B601 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav9-1A0A075B601 AC153890.1-201ENSMUST00000220021 2469 ntBASIC18.79■□□□□ 0.6
Trav9-1A0A075B601 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav9-1A0A075B601 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav9-1A0A075B601 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trav9-1A0A075B601 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trav9-1A0A075B601 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav9-1A0A075B601 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav9-1A0A075B601 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav9-1A0A075B601 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav9-1A0A075B601 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.76■□□□□ 0.59
Trav9-1A0A075B601 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav9-1A0A075B601 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav9-1A0A075B601 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav9-1A0A075B601 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav9-1A0A075B601 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav9-1A0A075B601 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.74■□□□□ 0.59
Trav9-1A0A075B601 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav9-1A0A075B601 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trav9-1A0A075B601 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav9-1A0A075B601 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav9-1A0A075B601 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav9-1A0A075B601 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.74■□□□□ 0.59
Trav9-1A0A075B601 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav9-1A0A075B601 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav9-1A0A075B601 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav9-1A0A075B601 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav9-1A0A075B601 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.7■□□□□ 0.58
Trav9-1A0A075B601 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav9-1A0A075B601 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav9-1A0A075B601 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav9-1A0A075B601 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.67■□□□□ 0.58
Trav9-1A0A075B601 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9-1A0A075B601 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9-1A0A075B601 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9-1A0A075B601 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav9-1A0A075B601 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav9-1A0A075B601 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trav9-1A0A075B601 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav9-1A0A075B601 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav9-1A0A075B601 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav9-1A0A075B601 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
Trav9-1A0A075B601 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav9-1A0A075B601 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Trav9-1A0A075B601 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Trav9-1A0A075B601 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC18.62■□□□□ 0.57
Trav9-1A0A075B601 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav9-1A0A075B601 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav9-1A0A075B601 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Trav9-1A0A075B601 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Trav9-1A0A075B601 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trav9-1A0A075B601 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav9-1A0A075B601 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.61■□□□□ 0.57
Trav9-1A0A075B601 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trav9-1A0A075B601 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Trav9-1A0A075B601 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Trav9-1A0A075B601 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav9-1A0A075B601 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav9-1A0A075B601 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.59■□□□□ 0.57
Trav9-1A0A075B601 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Trav9-1A0A075B601 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Trav9-1A0A075B601 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.58■□□□□ 0.56
Trav9-1A0A075B601 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Trav9-1A0A075B601 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav9-1A0A075B601 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav9-1A0A075B601 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav9-1A0A075B601 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms