Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.61■□□□□ 0.41
Lrif1Q8CDD9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrif1Q8CDD9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrif1Q8CDD9 Gm37179-201ENSMUST00000194862 823 ntBASIC17.6■□□□□ 0.41
Lrif1Q8CDD9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.6■□□□□ 0.41
Lrif1Q8CDD9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrif1Q8CDD9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lrif1Q8CDD9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrif1Q8CDD9 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lrif1Q8CDD9 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.6■□□□□ 0.41
Lrif1Q8CDD9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrif1Q8CDD9 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrif1Q8CDD9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrif1Q8CDD9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lrif1Q8CDD9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Reep4-203ENSMUST00000226563 1444 ntBASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lrif1Q8CDD9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lrif1Q8CDD9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Lrif1Q8CDD9 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Lrif1Q8CDD9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lrif1Q8CDD9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lrif1Q8CDD9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Lrif1Q8CDD9 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lrif1Q8CDD9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Lrif1Q8CDD9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrif1Q8CDD9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrif1Q8CDD9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrif1Q8CDD9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Lrif1Q8CDD9 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Lrif1Q8CDD9 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms