Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.281e-6■■□□□ 12.2
DDX59Q5T1V6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.241e-6■■□□□ 12.2
DDX59Q5T1V6 AC008763.2-201ENST00000598664 537 ntAPPRIS P5 TSL 514.27□□□□□ -0.131e-6■■□□□ 12.2
DDX59Q5T1V6 STXBP2-211ENST00000597068 1785 ntTSL 1 (best)13.75□□□□□ -0.211e-6■■□□□ 12.2
DDX59Q5T1V6 STXBP2-206ENST00000594221 747 ntTSL 313.6□□□□□ -0.231e-6■■□□□ 12.2
DDX59Q5T1V6 STXBP2-217ENST00000599737 1523 ntTSL 513.53□□□□□ -0.241e-6■■□□□ 12.2
DDX59Q5T1V6 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.411e-6■■□□□ 12.2
DDX59Q5T1V6 NEU4-216ENST00000494678 491 ntTSL 417.55■□□□□ 0.46e-9■■□□□ 12.2
DDX59Q5T1V6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.694e-9■■□□□ 12.2
DDX59Q5T1V6 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.664e-9■■□□□ 12.2
DDX59Q5T1V6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.84■□□□□ 0.614e-9■■□□□ 12.2
DDX59Q5T1V6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.63■□□□□ 0.574e-9■■□□□ 12.2
DDX59Q5T1V6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.1■□□□□ 0.494e-9■■□□□ 12.2
DDX59Q5T1V6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.06■□□□□ 0.484e-9■■□□□ 12.2
DDX59Q5T1V6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.474e-9■■□□□ 12.2
DDX59Q5T1V6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.59■□□□□ 0.254e-9■■□□□ 12.2
DDX59Q5T1V6 OGG1-212ENST00000426518 874 ntTSL 514.56□□□□□ -0.084e-9■■□□□ 12.2
DDX59Q5T1V6 OGG1-211ENST00000425665 930 ntTSL 313.69□□□□□ -0.224e-9■■□□□ 12.2
DDX59Q5T1V6 OGG1-207ENST00000352937 1392 ntTSL 1 (best)12.05□□□□□ -0.484e-9■■□□□ 12.2
DDX59Q5T1V6 OGG1-210ENST00000416333 396 ntTSL 1 (best)11.53□□□□□ -0.564e-9■■□□□ 12.2
DDX59Q5T1V6 OGG1-216ENST00000441094 860 ntTSL 311.14□□□□□ -0.634e-9■■□□□ 12.2
DDX59Q5T1V6 OGG1-208ENST00000383825 472 ntTSL 1 (best)9.01□□□□□ -0.974e-9■■□□□ 12.2
DDX59Q5T1V6 SAMD4B-206ENST00000596368 1176 ntTSL 5 BASIC10.11□□□□□ -0.791e-6■■□□□ 12.2
DDX59Q5T1V6 TFPI-211ENST00000481132 7690 ntTSL 26.4□□□□□ -1.399e-18■■□□□ 12.1
DDX59Q5T1V6 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.91□□□□□ -1.469e-18■■□□□ 12.1
DDX59Q5T1V6 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.06□□□□□ -1.769e-18■■□□□ 12.1
DDX59Q5T1V6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.779e-18■■□□□ 12.1
DDX59Q5T1V6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.869e-18■■□□□ 12.1
DDX59Q5T1V6 TFPI-208ENST00000435414 687 ntTSL 53.33□□□□□ -1.889e-18■■□□□ 12.1
DDX59Q5T1V6 AC104809.2-203ENST00000438506 588 ntTSL 313.88□□□□□ -0.198e-12■■□□□ 12.1
DDX59Q5T1V6 MED15-222ENST00000473244 2733 ntTSL 1 (best)19.19■□□□□ 0.664e-6■■□□□ 12.1
DDX59Q5T1V6 MED15-231ENST00000493216 4701 ntTSL 216.58■□□□□ 0.254e-6■■□□□ 12.1
DDX59Q5T1V6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.224e-6■■□□□ 12.1
DDX59Q5T1V6 GRB7-208ENST00000485182 879 ntTSL 215.8■□□□□ 0.124e-6■■□□□ 12.1
DDX59Q5T1V6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.074e-6■■□□□ 12.1
DDX59Q5T1V6 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.024e-6■■□□□ 12.1
DDX59Q5T1V6 MED15-211ENST00000433831 3267 ntTSL 513.97□□□□□ -0.174e-6■■□□□ 12.1
DDX59Q5T1V6 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.94□□□□□ -0.184e-6■■□□□ 12.1
DDX59Q5T1V6 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.69□□□□□ -0.224e-6■■□□□ 12.1
DDX59Q5T1V6 GRB7-209ENST00000577695 612 ntTSL 513.46□□□□□ -0.254e-6■■□□□ 12.1
DDX59Q5T1V6 GRB7-213ENST00000584819 1146 ntTSL 213.31□□□□□ -0.284e-6■■□□□ 12.1
DDX59Q5T1V6 GRB7-211ENST00000583813 560 ntTSL 413.14□□□□□ -0.314e-6■■□□□ 12.1
DDX59Q5T1V6 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.374e-6■■□□□ 12.1
DDX59Q5T1V6 GRB7-210ENST00000578702 630 ntTSL 312.57□□□□□ -0.44e-6■■□□□ 12.1
DDX59Q5T1V6 MED15-229ENST00000489651 3563 ntTSL 1 (best)11.29□□□□□ -0.64e-6■■□□□ 12.1
DDX59Q5T1V6 MED15-226ENST00000478831 707 ntTSL 410.38□□□□□ -0.754e-6■■□□□ 12.1
DDX59Q5T1V6 MED15-230ENST00000492381 3619 ntTSL 210.36□□□□□ -0.754e-6■■□□□ 12.1
DDX59Q5T1V6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.25■■□□□ 1.154e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-208ENST00000595881 2681 ntTSL 220.53■□□□□ 0.884e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-205ENST00000593431 582 ntTSL 317.51■□□□□ 0.394e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.344e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.314e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-214ENST00000598927 1616 ntTSL 516.92■□□□□ 0.34e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.48■□□□□ 0.234e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-203ENST00000452439 1351 ntTSL 216.06■□□□□ 0.164e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-209ENST00000596147 383 ntTSL 316.03■□□□□ 0.164e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-218ENST00000600273 582 ntTSL 215.46■□□□□ 0.074e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-212ENST00000598319 1888 ntTSL 515.01□□□□□ -0.014e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-216ENST00000599701 579 ntTSL 214.17□□□□□ -0.144e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-215ENST00000598936 870 ntTSL 314.13□□□□□ -0.154e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-206ENST00000594823 819 ntTSL 513.58□□□□□ -0.244e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-213ENST00000598491 578 ntTSL 513.18□□□□□ -0.34e-11■■□□□ 12.1
DDX59Q5T1V6 FCGRT-207ENST00000595677 714 ntTSL 513.1□□□□□ -0.314e-11■■□□□ 12.1
DDX59Q5T1V6 TIAL1-211ENST00000489822 2222 ntTSL 215.78■□□□□ 0.121e-21■■□□□ 12.1
DDX59Q5T1V6 TIAL1-213ENST00000497671 2321 ntTSL 1 (best)14.71□□□□□ -0.051e-21■■□□□ 12.1
DDX59Q5T1V6 ARHGAP11B-203ENST00000563110 2043 ntTSL 1 (best)15.8■□□□□ 0.121e-6■■□□□ 12.1
DDX59Q5T1V6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.031e-6■■□□□ 12.1
DDX59Q5T1V6 ARHGAP11B-206ENST00000566548 484 ntTSL 310.39□□□□□ -0.751e-6■■□□□ 12.1
DDX59Q5T1V6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.624e-7■■□□□ 12
DDX59Q5T1V6 CUL4A-211ENST00000498562 790 ntTSL 323.08■■□□□ 1.294e-7■■□□□ 12
DDX59Q5T1V6 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC12.83□□□□□ -0.364e-7■■□□□ 12
DDX59Q5T1V6 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.74□□□□□ -0.374e-7■■□□□ 12
DDX59Q5T1V6 CUL4A-201ENST00000326335 3705 ntTSL 1 (best) BASIC10.32□□□□□ -0.764e-7■■□□□ 12
DDX59Q5T1V6 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC10.09□□□□□ -0.794e-7■■□□□ 12
DDX59Q5T1V6 NEU4-213ENST00000435934 451 ntTSL 415.07■□□□□ 07e-9■■□□□ 12
DDX59Q5T1V6 LINC01089-206ENST00000537157 479 ntTSL 220.85■□□□□ 0.931e-7■■□□□ 12
DDX59Q5T1V6 RHOF-207ENST00000546227 1219 ntTSL 520.2■□□□□ 0.821e-7■■□□□ 12
DDX59Q5T1V6 METTL26-210ENST00000565799 716 ntTSL 319.99■□□□□ 0.791e-7■■□□□ 12
DDX59Q5T1V6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.9■□□□□ 0.781e-7■■□□□ 12
DDX59Q5T1V6 LINC01089-201ENST00000428029 1024 ntTSL 217.29■□□□□ 0.361e-7■■□□□ 12
DDX59Q5T1V6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.221e-6■■□□□ 12
DDX59Q5T1V6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.9■□□□□ 0.141e-6■■□□□ 12
DDX59Q5T1V6 LINC01089-210ENST00000543167 1059 ntTSL 215.36■□□□□ 0.051e-7■■□□□ 12
DDX59Q5T1V6 RHOF-206ENST00000545544 826 ntTSL 515.04■□□□□ -01e-7■■□□□ 12
DDX59Q5T1V6 RHOF-205ENST00000541657 1626 ntTSL 514.99□□□□□ -0.011e-7■■□□□ 12
DDX59Q5T1V6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.62□□□□□ -0.071e-7■■□□□ 12
DDX59Q5T1V6 LINC01089-203ENST00000535614 480 ntTSL 414.16□□□□□ -0.141e-7■■□□□ 12
DDX59Q5T1V6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.03□□□□□ -0.161e-7■■□□□ 12
DDX59Q5T1V6 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.91□□□□□ -0.181e-6■■□□□ 12
DDX59Q5T1V6 LINC01089-208ENST00000541694 875 ntTSL 213.91□□□□□ -0.181e-7■■□□□ 12
DDX59Q5T1V6 LINC01089-205ENST00000536662 560 ntTSL 4 BASIC12.12□□□□□ -0.471e-7■■□□□ 12
DDX59Q5T1V6 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.481e-6■■□□□ 12
DDX59Q5T1V6 MAP3K14-201ENST00000344686 4460 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.511e-7■■□□□ 12
DDX59Q5T1V6 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC11.78□□□□□ -0.521e-7■■□□□ 12
DDX59Q5T1V6 IGHMBP2-201ENST00000255078 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.541e-7■■□□□ 12
DDX59Q5T1V6 LINC01089-204ENST00000535643 1014 ntTSL 1 (best)11.2□□□□□ -0.621e-7■■□□□ 12
DDX59Q5T1V6 MAP3K14-206ENST00000640087 4583 ntTSL 1 (best)10.98□□□□□ -0.651e-7■■□□□ 12
DDX59Q5T1V6 MAP3K14-202ENST00000376926 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.651e-7■■□□□ 12
DDX59Q5T1V6 SAMD4B-204ENST00000596271 578 nt10.54□□□□□ -0.721e-7■■□□□ 12
DDX59Q5T1V6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.014e-9■■□□□ 12
Retrieved 100 of 7,289 protein–RNA pairs in 496 ms