Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim43aQ3TL54 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43aQ3TL54 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Gm22325-201ENSMUST00000158904 308 ntBASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Gm42778-201ENSMUST00000199644 553 ntBASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trim43aQ3TL54 Idnk-204ENSMUST00000226010 1898 ntBASIC18.9■□□□□ 0.62
Trim43aQ3TL54 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43aQ3TL54 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43aQ3TL54 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43aQ3TL54 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43aQ3TL54 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43aQ3TL54 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Trim43aQ3TL54 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.9■□□□□ 0.62
Trim43aQ3TL54 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43aQ3TL54 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43aQ3TL54 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim43aQ3TL54 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.9■□□□□ 0.62
Trim43aQ3TL54 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43aQ3TL54 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43aQ3TL54 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trim43aQ3TL54 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim43aQ3TL54 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trim43aQ3TL54 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.89■□□□□ 0.61
Trim43aQ3TL54 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43aQ3TL54 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.89■□□□□ 0.61
Trim43aQ3TL54 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43aQ3TL54 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43aQ3TL54 Gm18671-201ENSMUST00000214826 683 ntBASIC18.89■□□□□ 0.61
Trim43aQ3TL54 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43aQ3TL54 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43aQ3TL54 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trim43aQ3TL54 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trim43aQ3TL54 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43aQ3TL54 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Trim43aQ3TL54 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43aQ3TL54 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trim43aQ3TL54 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Reep4-203ENSMUST00000226563 1444 ntBASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim43aQ3TL54 Gm10849-201ENSMUST00000100397 618 ntBASIC18.87■□□□□ 0.61
Trim43aQ3TL54 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.87■□□□□ 0.61
Trim43aQ3TL54 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43aQ3TL54 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim43aQ3TL54 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim43aQ3TL54 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim43aQ3TL54 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Gm9988-201ENSMUST00000069786 435 ntBASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim43aQ3TL54 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms