Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.74■□□□□ 0.59
Gm11236J3QMS7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Gm10013-201ENSMUST00000106074 672 ntBASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Mir5130-201ENSMUST00000175160 84 ntBASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Gm11236J3QMS7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11236J3QMS7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.73■□□□□ 0.59
Gm11236J3QMS7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11236J3QMS7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.73■□□□□ 0.59
Gm11236J3QMS7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Gm11236J3QMS7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.73■□□□□ 0.59
Gm11236J3QMS7 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11236J3QMS7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11236J3QMS7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Gm11236J3QMS7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Gm11236J3QMS7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Gm11236J3QMS7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Gm11236J3QMS7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.72■□□□□ 0.59
Gm11236J3QMS7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm11236J3QMS7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm11236J3QMS7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm11236J3QMS7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.72■□□□□ 0.59
Gm11236J3QMS7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm11236J3QMS7 Gm13401-201ENSMUST00000117074 291 ntBASIC18.72■□□□□ 0.59
Gm11236J3QMS7 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Gm11236J3QMS7 Gm24841-201ENSMUST00000158676 357 ntBASIC18.72■□□□□ 0.59
Gm11236J3QMS7 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Gm11236J3QMS7 Gm29791-202ENSMUST00000207888 369 ntBASIC18.72■□□□□ 0.59
Gm11236J3QMS7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.72■□□□□ 0.59
Gm11236J3QMS7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm11236J3QMS7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Gm11236J3QMS7 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Gm11236J3QMS7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.71■□□□□ 0.59
Gm11236J3QMS7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.71■□□□□ 0.58
Gm11236J3QMS7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Gm11236J3QMS7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm11236J3QMS7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm11236J3QMS7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Gm11236J3QMS7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.7■□□□□ 0.58
Gm11236J3QMS7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm11236J3QMS7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm11236J3QMS7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm11236J3QMS7 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Gm11236J3QMS7 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm11236J3QMS7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Gm11236J3QMS7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm11236J3QMS7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.69■□□□□ 0.58
Gm11236J3QMS7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm11236J3QMS7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm11236J3QMS7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gm11236J3QMS7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.69■□□□□ 0.58
Gm11236J3QMS7 Gm23634-201ENSMUST00000175071 91 ntBASIC18.69■□□□□ 0.58
Gm11236J3QMS7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gm11236J3QMS7 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Gm11236J3QMS7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gm11236J3QMS7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm11236J3QMS7 Gm7638-201ENSMUST00000121348 967 ntBASIC18.68■□□□□ 0.58
Gm11236J3QMS7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gm11236J3QMS7 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.68■□□□□ 0.58
Gm11236J3QMS7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gm11236J3QMS7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms