Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SynbQ8BI41 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SynbQ8BI41 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.18■□□□□ 0.34
SynbQ8BI41 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SynbQ8BI41 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.18■□□□□ 0.34
SynbQ8BI41 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SynbQ8BI41 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SynbQ8BI41 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SynbQ8BI41 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SynbQ8BI41 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SynbQ8BI41 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SynbQ8BI41 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SynbQ8BI41 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SynbQ8BI41 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SynbQ8BI41 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SynbQ8BI41 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.17■□□□□ 0.34
SynbQ8BI41 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SynbQ8BI41 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.17■□□□□ 0.34
SynbQ8BI41 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.17■□□□□ 0.34
SynbQ8BI41 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.17■□□□□ 0.34
SynbQ8BI41 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
SynbQ8BI41 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SynbQ8BI41 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SynbQ8BI41 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.16■□□□□ 0.34
SynbQ8BI41 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SynbQ8BI41 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SynbQ8BI41 Gm15378-201ENSMUST00000121894 207 ntBASIC17.16■□□□□ 0.34
SynbQ8BI41 Gm10698-201ENSMUST00000182663 604 ntBASIC17.16■□□□□ 0.34
SynbQ8BI41 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.16■□□□□ 0.34
SynbQ8BI41 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SynbQ8BI41 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SynbQ8BI41 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SynbQ8BI41 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SynbQ8BI41 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SynbQ8BI41 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SynbQ8BI41 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SynbQ8BI41 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SynbQ8BI41 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SynbQ8BI41 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SynbQ8BI41 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.15■□□□□ 0.34
SynbQ8BI41 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.15■□□□□ 0.34
SynbQ8BI41 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
SynbQ8BI41 Gm2399-201ENSMUST00000104944 225 ntBASIC17.15■□□□□ 0.34
SynbQ8BI41 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.15■□□□□ 0.34
SynbQ8BI41 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SynbQ8BI41 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SynbQ8BI41 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SynbQ8BI41 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SynbQ8BI41 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SynbQ8BI41 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SynbQ8BI41 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.15■□□□□ 0.34
SynbQ8BI41 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SynbQ8BI41 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
SynbQ8BI41 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SynbQ8BI41 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SynbQ8BI41 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SynbQ8BI41 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SynbQ8BI41 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SynbQ8BI41 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SynbQ8BI41 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SynbQ8BI41 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SynbQ8BI41 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SynbQ8BI41 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SynbQ8BI41 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.13■□□□□ 0.33
SynbQ8BI41 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SynbQ8BI41 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SynbQ8BI41 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SynbQ8BI41 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SynbQ8BI41 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SynbQ8BI41 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.13■□□□□ 0.33
SynbQ8BI41 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SynbQ8BI41 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.13■□□□□ 0.33
SynbQ8BI41 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SynbQ8BI41 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.12■□□□□ 0.33
SynbQ8BI41 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.12■□□□□ 0.33
SynbQ8BI41 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SynbQ8BI41 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SynbQ8BI41 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms