Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SynbQ8BI41 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynbQ8BI41 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.3■□□□□ 0.36
SynbQ8BI41 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SynbQ8BI41 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynbQ8BI41 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynbQ8BI41 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.3■□□□□ 0.36
SynbQ8BI41 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SynbQ8BI41 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SynbQ8BI41 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.3■□□□□ 0.36
SynbQ8BI41 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SynbQ8BI41 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.3■□□□□ 0.36
SynbQ8BI41 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.3■□□□□ 0.36
SynbQ8BI41 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynbQ8BI41 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynbQ8BI41 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynbQ8BI41 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SynbQ8BI41 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SynbQ8BI41 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynbQ8BI41 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.3■□□□□ 0.36
SynbQ8BI41 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynbQ8BI41 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SynbQ8BI41 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SynbQ8BI41 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SynbQ8BI41 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SynbQ8BI41 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.29■□□□□ 0.36
SynbQ8BI41 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SynbQ8BI41 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SynbQ8BI41 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SynbQ8BI41 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SynbQ8BI41 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynbQ8BI41 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynbQ8BI41 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynbQ8BI41 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SynbQ8BI41 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynbQ8BI41 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynbQ8BI41 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynbQ8BI41 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SynbQ8BI41 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SynbQ8BI41 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SynbQ8BI41 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SynbQ8BI41 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynbQ8BI41 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynbQ8BI41 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynbQ8BI41 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.28■□□□□ 0.36
SynbQ8BI41 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynbQ8BI41 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynbQ8BI41 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SynbQ8BI41 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SynbQ8BI41 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SynbQ8BI41 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SynbQ8BI41 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SynbQ8BI41 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SynbQ8BI41 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SynbQ8BI41 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SynbQ8BI41 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.27■□□□□ 0.36
SynbQ8BI41 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SynbQ8BI41 Gm13836-201ENSMUST00000121159 501 ntBASIC17.27■□□□□ 0.36
SynbQ8BI41 Gm18666-201ENSMUST00000190039 958 ntBASIC17.27■□□□□ 0.36
SynbQ8BI41 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SynbQ8BI41 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SynbQ8BI41 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SynbQ8BI41 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SynbQ8BI41 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SynbQ8BI41 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
SynbQ8BI41 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SynbQ8BI41 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynbQ8BI41 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.26■□□□□ 0.35
SynbQ8BI41 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynbQ8BI41 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SynbQ8BI41 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SynbQ8BI41 Gm44549-201ENSMUST00000208351 577 ntBASIC17.26■□□□□ 0.35
SynbQ8BI41 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.26■□□□□ 0.35
SynbQ8BI41 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SynbQ8BI41 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynbQ8BI41 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.26■□□□□ 0.35
SynbQ8BI41 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SynbQ8BI41 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynbQ8BI41 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SynbQ8BI41 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SynbQ8BI41 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynbQ8BI41 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.25■□□□□ 0.35
SynbQ8BI41 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynbQ8BI41 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynbQ8BI41 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynbQ8BI41 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynbQ8BI41 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynbQ8BI41 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.25■□□□□ 0.35
SynbQ8BI41 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SynbQ8BI41 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SynbQ8BI41 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SynbQ8BI41 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SynbQ8BI41 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynbQ8BI41 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SynbQ8BI41 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.24■□□□□ 0.35
SynbQ8BI41 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SynbQ8BI41 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
SynbQ8BI41 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SynbQ8BI41 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SynbQ8BI41 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms