Protein–RNA interactions for Protein: P0CX60

TY1A-PR2, Transposon Ty1-PR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR2P0CX60 tL(UAA)NtL(UAA)N 84 nt5.01□□□□□ -1.61
TY1A-PR2P0CX60 YGR242WYGR242W 309 nt5.01□□□□□ -1.61
TY1A-PR2P0CX60 HSF1YGL073W 2502 nt5.01□□□□□ -1.61
TY1A-PR2P0CX60 ICL1YER065C 1674 nt5□□□□□ -1.61
TY1A-PR2P0CX60 SKG3YLR187W 3081 nt5□□□□□ -1.61
TY1A-PR2P0CX60 KIN82YCR091W 2163 nt5□□□□□ -1.61
TY1A-PR2P0CX60 ATO3YDR384C 828 nt5□□□□□ -1.61
TY1A-PR2P0CX60 RPS8BYER102W 603 nt5□□□□□ -1.61
TY1A-PR2P0CX60 YHR213W-BYHR213W-B 300 nt5□□□□□ -1.61
TY1A-PR2P0CX60 RPS21BYJL136C 264 nt5□□□□□ -1.61
TY1A-PR2P0CX60 RPS4AYJR145C 786 nt5□□□□□ -1.61
TY1A-PR2P0CX60 YAR064WYAR064W 300 nt5□□□□□ -1.61
TY1A-PR2P0CX60 ARO2YGL148W 1131 nt4.99□□□□□ -1.61
TY1A-PR2P0CX60 VPS55YJR044C 423 nt4.99□□□□□ -1.61
TY1A-PR2P0CX60 FIT2YOR382W 462 nt4.99□□□□□ -1.61
TY1A-PR2P0CX60 ATP22YDR350C 2055 nt4.99□□□□□ -1.61
TY1A-PR2P0CX60 LAS21YJL062W 2493 nt4.98□□□□□ -1.61
TY1A-PR2P0CX60 RPL35AYDL191W 363 nt4.98□□□□□ -1.61
TY1A-PR2P0CX60 FRQ1YDR373W 573 nt4.98□□□□□ -1.61
TY1A-PR2P0CX60 YAE1YJR067C 426 nt4.98□□□□□ -1.61
TY1A-PR2P0CX60 VPS1YKR001C 2115 nt4.98□□□□□ -1.61
TY1A-PR2P0CX60 YBL053WYBL053W 375 nt4.98□□□□□ -1.61
TY1A-PR2P0CX60 AMD1YML035C 2433 nt4.98□□□□□ -1.61
TY1A-PR2P0CX60 MCM2YBL023C 2607 nt4.98□□□□□ -1.61
TY1A-PR2P0CX60 UBX7YBR273C 1311 nt4.97□□□□□ -1.61
TY1A-PR2P0CX60 COG8YML071C 1824 nt4.97□□□□□ -1.61
TY1A-PR2P0CX60 SNX41YDR425W 1878 nt4.97□□□□□ -1.61
TY1A-PR2P0CX60 VTC1YER072W 390 nt4.97□□□□□ -1.61
TY1A-PR2P0CX60 YER187WYER187W 426 nt4.97□□□□□ -1.61
TY1A-PR2P0CX60 YHR212CYHR212C 336 nt4.97□□□□□ -1.61
TY1A-PR2P0CX60 YAL047W-AYAL047W-A 330 nt4.97□□□□□ -1.61
TY1A-PR2P0CX60 YAR060CYAR060C 336 nt4.97□□□□□ -1.61
TY1A-PR2P0CX60 HPF1YOL155C 2904 nt4.97□□□□□ -1.61
TY1A-PR2P0CX60 YJR030CYJR030C 2238 nt4.97□□□□□ -1.61
TY1A-PR2P0CX60 PTR3YFR029W 2037 nt4.97□□□□□ -1.61
TY1A-PR2P0CX60 COX1Q0045 1605 nt4.97□□□□□ -1.61
TY1A-PR2P0CX60 SKM1YOL113W 1968 nt4.96□□□□□ -1.61
TY1A-PR2P0CX60 ELP2YGR200C 2367 nt4.96□□□□□ -1.62
TY1A-PR2P0CX60 YHL042WYHL042W 453 nt4.96□□□□□ -1.62
TY1A-PR2P0CX60 URM1YIL008W 300 nt4.96□□□□□ -1.62
TY1A-PR2P0CX60 SSP120YLR250W 705 nt4.96□□□□□ -1.62
TY1A-PR2P0CX60 BIT2YBR270C 1638 nt4.96□□□□□ -1.62
TY1A-PR2P0CX60 DBP6YNR038W 1890 nt4.95□□□□□ -1.62
TY1A-PR2P0CX60 YDR340WYDR340W 303 nt4.95□□□□□ -1.62
TY1A-PR2P0CX60 BAT1YHR208W 1182 nt4.95□□□□□ -1.62
TY1A-PR2P0CX60 RAD27YKL113C 1149 nt4.95□□□□□ -1.62
TY1A-PR2P0CX60 SAP30YMR263W 606 nt4.95□□□□□ -1.62
TY1A-PR2P0CX60 YMR326CYMR326C 309 nt4.95□□□□□ -1.62
TY1A-PR2P0CX60 YNL179CYNL179C 438 nt4.95□□□□□ -1.62
TY1A-PR2P0CX60 SAP155YFR040W 3009 nt4.95□□□□□ -1.62
TY1A-PR2P0CX60 ORC2YBR060C 1863 nt4.94□□□□□ -1.62
TY1A-PR2P0CX60 ATM1YMR301C 2073 nt4.94□□□□□ -1.62
TY1A-PR2P0CX60 APC5YOR249C 2058 nt4.94□□□□□ -1.62
TY1A-PR2P0CX60 IGO2YHR132W-A 396 nt4.94□□□□□ -1.62
TY1A-PR2P0CX60 YIL102CYIL102C 306 nt4.94□□□□□ -1.62
TY1A-PR2P0CX60 STM1YLR150W 822 nt4.94□□□□□ -1.62
TY1A-PR2P0CX60 YNL010WYNL010W 726 nt4.94□□□□□ -1.62
TY1A-PR2P0CX60 PRM1YNL279W 1986 nt4.94□□□□□ -1.62
TY1A-PR2P0CX60 EXO70YJL085W 1872 nt4.94□□□□□ -1.62
TY1A-PR2P0CX60 DUR1,2YBR208C 5508 nt4.94□□□□□ -1.62
TY1A-PR2P0CX60 TAF7YMR227C 1773 nt4.93□□□□□ -1.62
TY1A-PR2P0CX60 AAP1YHR047C 2571 nt4.93□□□□□ -1.62
TY1A-PR2P0CX60 PIF1YML061C 2580 nt4.93□□□□□ -1.62
TY1A-PR2P0CX60 PAU2YEL049W 363 nt4.93□□□□□ -1.62
TY1A-PR2P0CX60 MRP8YKL142W 660 nt4.93□□□□□ -1.62
TY1A-PR2P0CX60 YOR050CYOR050C 348 nt4.93□□□□□ -1.62
TY1A-PR2P0CX60 MF(ALPHA)1YPL187W 498 nt4.93□□□□□ -1.62
TY1A-PR2P0CX60 SGO1YOR073W 1773 nt4.93□□□□□ -1.62
TY1A-PR2P0CX60 RIM20YOR275C 1986 nt4.93□□□□□ -1.62
TY1A-PR2P0CX60 HTA1YDR225W 399 nt4.92□□□□□ -1.62
TY1A-PR2P0CX60 YDR442WYDR442W 393 nt4.92□□□□□ -1.62
TY1A-PR2P0CX60 FMP10YER182W 735 nt4.92□□□□□ -1.62
TY1A-PR2P0CX60 OLI1Q0130 231 nt4.92□□□□□ -1.62
TY1A-PR2P0CX60 YKL111CYKL111C 336 nt4.92□□□□□ -1.62
TY1A-PR2P0CX60 AAD15YOL165C 432 nt4.92□□□□□ -1.62
TY1A-PR2P0CX60 YOR329W-AYOR329W-A 210 nt4.92□□□□□ -1.62
TY1A-PR2P0CX60 NUT2YPR168W 474 nt4.92□□□□□ -1.62
TY1A-PR2P0CX60 FRE4YNR060W 2160 nt4.92□□□□□ -1.62
TY1A-PR2P0CX60 OCA5YHL029C 2040 nt4.92□□□□□ -1.62
TY1A-PR2P0CX60 LCB4YOR171C 1875 nt4.92□□□□□ -1.62
TY1A-PR2P0CX60 YNR073CYNR073C 1509 nt4.92□□□□□ -1.62
TY1A-PR2P0CX60 PDI1YCL043C 1569 nt4.91□□□□□ -1.62
TY1A-PR2P0CX60 PEX6YNL329C 3093 nt4.91□□□□□ -1.62
TY1A-PR2P0CX60 MPS3YJL019W 2049 nt4.91□□□□□ -1.62
TY1A-PR2P0CX60 MZM1YDR493W 372 nt4.91□□□□□ -1.62
TY1A-PR2P0CX60 RPL37AYLR185W 267 nt4.91□□□□□ -1.62
TY1A-PR2P0CX60 YMR252CYMR252C 405 nt4.91□□□□□ -1.62
TY1A-PR2P0CX60 TIF4631YGR162W 2859 nt4.9□□□□□ -1.62
TY1A-PR2P0CX60 IKS1YJL057C 2004 nt4.9□□□□□ -1.62
TY1A-PR2P0CX60 YDR061WYDR061W 1620 nt4.9□□□□□ -1.62
TY1A-PR2P0CX60 AVT3YKL146W 2079 nt4.9□□□□□ -1.62
TY1A-PR2P0CX60 ARN2YHL047C 1863 nt4.9□□□□□ -1.62
TY1A-PR2P0CX60 YHR182WYHR182W 2358 nt4.9□□□□□ -1.62
TY1A-PR2P0CX60 YDR250CYDR250C 276 nt4.9□□□□□ -1.63
TY1A-PR2P0CX60 MTC3YGL226W 372 nt4.9□□□□□ -1.63
TY1A-PR2P0CX60 YOL046CYOL046C 675 nt4.9□□□□□ -1.63
TY1A-PR2P0CX60 GRS1YBR121C 2004 nt4.9□□□□□ -1.63
TY1A-PR2P0CX60 STB2YMR053C 2553 nt4.9□□□□□ -1.63
TY1A-PR2P0CX60 MSC2YDR205W 2175 nt4.89□□□□□ -1.63
TY1A-PR2P0CX60 YBR238CYBR238C 2196 nt4.89□□□□□ -1.63
Retrieved 100 of 7,029 protein–RNA pairs in 32.7 ms