Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
HMGCLP35914 AL049796.1-201ENST00000565336 1766 ntBASIC20.87■□□□□ 0.93
HMGCLP35914 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
HMGCLP35914 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCLP35914 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLP35914 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLP35914 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLP35914 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.86■□□□□ 0.93
HMGCLP35914 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HMGCLP35914 AC016769.1-201ENST00000409132 1010 ntBASIC20.86■□□□□ 0.93
HMGCLP35914 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLP35914 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.86■□□□□ 0.93
HMGCLP35914 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGCLP35914 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.86■□□□□ 0.93
HMGCLP35914 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.86■□□□□ 0.93
HMGCLP35914 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGCLP35914 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
HMGCLP35914 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
HMGCLP35914 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLP35914 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCLP35914 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 AF106564.1-201ENST00000607058 2553 ntBASIC20.85■□□□□ 0.93
HMGCLP35914 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
HMGCLP35914 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.85■□□□□ 0.93
HMGCLP35914 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.85■□□□□ 0.93
HMGCLP35914 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HMGCLP35914 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCLP35914 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
HMGCLP35914 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.85■□□□□ 0.93
HMGCLP35914 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGCLP35914 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCLP35914 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCLP35914 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCLP35914 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCLP35914 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCLP35914 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCLP35914 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.84■□□□□ 0.93
HMGCLP35914 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.84■□□□□ 0.93
HMGCLP35914 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.84■□□□□ 0.93
HMGCLP35914 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGCLP35914 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGCLP35914 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCLP35914 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HMGCLP35914 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGCLP35914 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCLP35914 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
HMGCLP35914 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCLP35914 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGCLP35914 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCLP35914 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCLP35914 AC243732.1-201ENST00000612648 864 ntBASIC20.83■□□□□ 0.93
HMGCLP35914 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGCLP35914 RARRES2P11-201ENST00000635158 484 ntBASIC20.83■□□□□ 0.93
HMGCLP35914 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCLP35914 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCLP35914 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
HMGCLP35914 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.83■□□□□ 0.92
HMGCLP35914 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCLP35914 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLP35914 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HMGCLP35914 AC245052.3-201ENST00000450182 901 ntBASIC20.82■□□□□ 0.92
HMGCLP35914 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.82■□□□□ 0.92
HMGCLP35914 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.82■□□□□ 0.92
HMGCLP35914 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLP35914 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLP35914 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLP35914 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLP35914 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.82■□□□□ 0.92
HMGCLP35914 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCLP35914 AC005229.4-201ENST00000610085 2198 ntBASIC20.82■□□□□ 0.92
HMGCLP35914 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HMGCLP35914 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGCLP35914 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLP35914 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
HMGCLP35914 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HMGCLP35914 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
HMGCLP35914 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.81■□□□□ 0.92
HMGCLP35914 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLP35914 AC092437.1-201ENST00000624794 1048 ntBASIC20.81■□□□□ 0.92
HMGCLP35914 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HMGCLP35914 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HMGCLP35914 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms