Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rhox4bQ9JI43 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rhox4bQ9JI43 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.64■□□□□ 0.74
Rhox4bQ9JI43 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rhox4bQ9JI43 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rhox4bQ9JI43 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rhox4bQ9JI43 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rhox4bQ9JI43 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rhox4bQ9JI43 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rhox4bQ9JI43 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rhox4bQ9JI43 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.62■□□□□ 0.73
Rhox4bQ9JI43 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rhox4bQ9JI43 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rhox4bQ9JI43 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rhox4bQ9JI43 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rhox4bQ9JI43 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.6■□□□□ 0.73
Rhox4bQ9JI43 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rhox4bQ9JI43 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rhox4bQ9JI43 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rhox4bQ9JI43 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rhox4bQ9JI43 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rhox4bQ9JI43 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rhox4bQ9JI43 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rhox4bQ9JI43 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rhox4bQ9JI43 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rhox4bQ9JI43 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rhox4bQ9JI43 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rhox4bQ9JI43 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rhox4bQ9JI43 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Rhox4bQ9JI43 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Rhox4bQ9JI43 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rhox4bQ9JI43 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rhox4bQ9JI43 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rhox4bQ9JI43 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.56■□□□□ 0.72
Rhox4bQ9JI43 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rhox4bQ9JI43 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.55■□□□□ 0.72
Rhox4bQ9JI43 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rhox4bQ9JI43 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rhox4bQ9JI43 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rhox4bQ9JI43 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rhox4bQ9JI43 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rhox4bQ9JI43 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rhox4bQ9JI43 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rhox4bQ9JI43 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rhox4bQ9JI43 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rhox4bQ9JI43 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rhox4bQ9JI43 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rhox4bQ9JI43 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rhox4bQ9JI43 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rhox4bQ9JI43 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rhox4bQ9JI43 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rhox4bQ9JI43 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rhox4bQ9JI43 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.49■□□□□ 0.71
Rhox4bQ9JI43 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rhox4bQ9JI43 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rhox4bQ9JI43 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Rhox4bQ9JI43 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rhox4bQ9JI43 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rhox4bQ9JI43 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rhox4bQ9JI43 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rhox4bQ9JI43 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rhox4bQ9JI43 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rhox4bQ9JI43 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rhox4bQ9JI43 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.46■□□□□ 0.71
Rhox4bQ9JI43 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rhox4bQ9JI43 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rhox4bQ9JI43 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rhox4bQ9JI43 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rhox4bQ9JI43 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Rhox4bQ9JI43 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Rhox4bQ9JI43 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rhox4bQ9JI43 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rhox4bQ9JI43 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rhox4bQ9JI43 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rhox4bQ9JI43 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rhox4bQ9JI43 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rhox4bQ9JI43 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rhox4bQ9JI43 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rhox4bQ9JI43 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.4■□□□□ 0.7
Rhox4bQ9JI43 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rhox4bQ9JI43 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rhox4bQ9JI43 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rhox4bQ9JI43 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rhox4bQ9JI43 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rhox4bQ9JI43 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rhox4bQ9JI43 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Rhox4bQ9JI43 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rhox4bQ9JI43 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rhox4bQ9JI43 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rhox4bQ9JI43 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rhox4bQ9JI43 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rhox4bQ9JI43 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rhox4bQ9JI43 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.36■□□□□ 0.69
Rhox4bQ9JI43 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Rhox4bQ9JI43 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Rhox4bQ9JI43 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rhox4bQ9JI43 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rhox4bQ9JI43 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rhox4bQ9JI43 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.33■□□□□ 0.68
Rhox4bQ9JI43 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 8.3 ms