Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ssbp3Q9D032 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssbp3Q9D032 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ssbp3Q9D032 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Ssbp3Q9D032 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.57■□□□□ 0.88
Ssbp3Q9D032 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ssbp3Q9D032 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.56■□□□□ 0.88
Ssbp3Q9D032 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ssbp3Q9D032 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.56■□□□□ 0.88
Ssbp3Q9D032 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ssbp3Q9D032 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssbp3Q9D032 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssbp3Q9D032 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ssbp3Q9D032 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ssbp3Q9D032 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ssbp3Q9D032 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ssbp3Q9D032 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ssbp3Q9D032 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssbp3Q9D032 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
Ssbp3Q9D032 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ssbp3Q9D032 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssbp3Q9D032 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ssbp3Q9D032 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ssbp3Q9D032 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.5■□□□□ 0.87
Ssbp3Q9D032 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ssbp3Q9D032 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ssbp3Q9D032 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ssbp3Q9D032 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ssbp3Q9D032 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssbp3Q9D032 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ssbp3Q9D032 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ssbp3Q9D032 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ssbp3Q9D032 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssbp3Q9D032 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.46■□□□□ 0.87
Ssbp3Q9D032 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ssbp3Q9D032 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ssbp3Q9D032 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ssbp3Q9D032 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.44■□□□□ 0.86
Ssbp3Q9D032 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ssbp3Q9D032 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ssbp3Q9D032 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ssbp3Q9D032 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ssbp3Q9D032 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.41■□□□□ 0.86
Ssbp3Q9D032 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ssbp3Q9D032 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ssbp3Q9D032 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.4■□□□□ 0.86
Ssbp3Q9D032 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ssbp3Q9D032 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ssbp3Q9D032 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.39■□□□□ 0.85
Ssbp3Q9D032 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ssbp3Q9D032 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ssbp3Q9D032 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ssbp3Q9D032 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ssbp3Q9D032 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ssbp3Q9D032 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ssbp3Q9D032 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.35■□□□□ 0.85
Ssbp3Q9D032 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ssbp3Q9D032 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssbp3Q9D032 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ssbp3Q9D032 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ssbp3Q9D032 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssbp3Q9D032 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ssbp3Q9D032 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ssbp3Q9D032 Zxda-201ENSMUST00000117281 2621 ntBASIC20.33■□□□□ 0.84
Ssbp3Q9D032 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ssbp3Q9D032 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.31■□□□□ 0.84
Ssbp3Q9D032 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ssbp3Q9D032 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Ssbp3Q9D032 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ssbp3Q9D032 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ssbp3Q9D032 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ssbp3Q9D032 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ssbp3Q9D032 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ssbp3Q9D032 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ssbp3Q9D032 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.27■□□□□ 0.84
Ssbp3Q9D032 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ssbp3Q9D032 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Ssbp3Q9D032 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
Ssbp3Q9D032 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ssbp3Q9D032 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssbp3Q9D032 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ssbp3Q9D032 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ssbp3Q9D032 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ssbp3Q9D032 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssbp3Q9D032 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ssbp3Q9D032 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.24■□□□□ 0.83
Ssbp3Q9D032 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssbp3Q9D032 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ssbp3Q9D032 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ssbp3Q9D032 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ssbp3Q9D032 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ssbp3Q9D032 Gm6821-201ENSMUST00000107540 542 ntBASIC20.22■□□□□ 0.83
Ssbp3Q9D032 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ssbp3Q9D032 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ssbp3Q9D032 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ssbp3Q9D032 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.19■□□□□ 0.82
Ssbp3Q9D032 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ssbp3Q9D032 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ssbp3Q9D032 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ssbp3Q9D032 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms