Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Retreg3Q9CQV4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Retreg3Q9CQV4 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.14■■□□□ 1.62
Retreg3Q9CQV4 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Retreg3Q9CQV4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Retreg3Q9CQV4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retreg3Q9CQV4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retreg3Q9CQV4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Retreg3Q9CQV4 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Retreg3Q9CQV4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.11■■□□□ 1.61
Retreg3Q9CQV4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Retreg3Q9CQV4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.1■■□□□ 1.61
Retreg3Q9CQV4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.09■■□□□ 1.61
Retreg3Q9CQV4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Retreg3Q9CQV4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
Retreg3Q9CQV4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Retreg3Q9CQV4 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.07■■□□□ 1.6
Retreg3Q9CQV4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC25.06■■□□□ 1.6
Retreg3Q9CQV4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Retreg3Q9CQV4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Retreg3Q9CQV4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Retreg3Q9CQV4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retreg3Q9CQV4 Gm45855-201ENSMUST00000212546 880 ntBASIC25.03■■□□□ 1.6
Retreg3Q9CQV4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retreg3Q9CQV4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Retreg3Q9CQV4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC25.02■■□□□ 1.6
Retreg3Q9CQV4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retreg3Q9CQV4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retreg3Q9CQV4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retreg3Q9CQV4 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25■■□□□ 1.59
Retreg3Q9CQV4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.99■■□□□ 1.59
Retreg3Q9CQV4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.99■■□□□ 1.59
Retreg3Q9CQV4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Retreg3Q9CQV4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Retreg3Q9CQV4 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retreg3Q9CQV4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retreg3Q9CQV4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retreg3Q9CQV4 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.97■■□□□ 1.59
Retreg3Q9CQV4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Retreg3Q9CQV4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retreg3Q9CQV4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retreg3Q9CQV4 Gm9397-201ENSMUST00000200125 605 ntBASIC24.96■■□□□ 1.59
Retreg3Q9CQV4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Retreg3Q9CQV4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Retreg3Q9CQV4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retreg3Q9CQV4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Retreg3Q9CQV4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.93■■□□□ 1.58
Retreg3Q9CQV4 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Retreg3Q9CQV4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Retreg3Q9CQV4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.92■■□□□ 1.58
Retreg3Q9CQV4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.92■■□□□ 1.58
Retreg3Q9CQV4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.91■■□□□ 1.58
Retreg3Q9CQV4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Retreg3Q9CQV4 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Retreg3Q9CQV4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.9■■□□□ 1.58
Retreg3Q9CQV4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Retreg3Q9CQV4 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Retreg3Q9CQV4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retreg3Q9CQV4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retreg3Q9CQV4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
Retreg3Q9CQV4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.87■■□□□ 1.57
Retreg3Q9CQV4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.87■■□□□ 1.57
Retreg3Q9CQV4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Retreg3Q9CQV4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.85■■□□□ 1.57
Retreg3Q9CQV4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Retreg3Q9CQV4 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Retreg3Q9CQV4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Retreg3Q9CQV4 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.84■■□□□ 1.57
Retreg3Q9CQV4 Amer2-203ENSMUST00000225247 2662 ntBASIC24.83■■□□□ 1.57
Retreg3Q9CQV4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
Retreg3Q9CQV4 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.82■■□□□ 1.56
Retreg3Q9CQV4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
Retreg3Q9CQV4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.81■■□□□ 1.56
Retreg3Q9CQV4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.81■■□□□ 1.56
Retreg3Q9CQV4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.81■■□□□ 1.56
Retreg3Q9CQV4 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Retreg3Q9CQV4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Retreg3Q9CQV4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Retreg3Q9CQV4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Retreg3Q9CQV4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Retreg3Q9CQV4 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retreg3Q9CQV4 Gm24970-201ENSMUST00000175582 82 ntBASIC24.78■■□□□ 1.56
Retreg3Q9CQV4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.78■■□□□ 1.56
Retreg3Q9CQV4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Retreg3Q9CQV4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Retreg3Q9CQV4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Retreg3Q9CQV4 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Retreg3Q9CQV4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Retreg3Q9CQV4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retreg3Q9CQV4 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retreg3Q9CQV4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
Retreg3Q9CQV4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.74■■□□□ 1.55
Retreg3Q9CQV4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Retreg3Q9CQV4 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Retreg3Q9CQV4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Retreg3Q9CQV4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Retreg3Q9CQV4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Retreg3Q9CQV4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
Retreg3Q9CQV4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Retreg3Q9CQV4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.71■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms