Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trim16Q99PP9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Trim16Q99PP9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Trim16Q99PP9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim16Q99PP9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC23.81■■□□□ 1.4
Trim16Q99PP9 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim16Q99PP9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim16Q99PP9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Trim16Q99PP9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Trim16Q99PP9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trim16Q99PP9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Trim16Q99PP9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Trim16Q99PP9 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trim16Q99PP9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim16Q99PP9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Trim16Q99PP9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim16Q99PP9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Trim16Q99PP9 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.74■■□□□ 1.39
Trim16Q99PP9 Tdp2-203ENSMUST00000223804 1136 ntBASIC23.74■■□□□ 1.39
Trim16Q99PP9 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim16Q99PP9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim16Q99PP9 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim16Q99PP9 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.73■■□□□ 1.39
Trim16Q99PP9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Trim16Q99PP9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim16Q99PP9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Trim16Q99PP9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim16Q99PP9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trim16Q99PP9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Trim16Q99PP9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Trim16Q99PP9 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.68■■□□□ 1.38
Trim16Q99PP9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Trim16Q99PP9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.68■■□□□ 1.38
Trim16Q99PP9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Trim16Q99PP9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Trim16Q99PP9 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim16Q99PP9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Trim16Q99PP9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Trim16Q99PP9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Trim16Q99PP9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim16Q99PP9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trim16Q99PP9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Trim16Q99PP9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Trim16Q99PP9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Trim16Q99PP9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim16Q99PP9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.63■■□□□ 1.37
Trim16Q99PP9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Trim16Q99PP9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Trim16Q99PP9 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Trim16Q99PP9 Gm9397-201ENSMUST00000200125 605 ntBASIC23.61■■□□□ 1.37
Trim16Q99PP9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trim16Q99PP9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim16Q99PP9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim16Q99PP9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23.6■■□□□ 1.37
Trim16Q99PP9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim16Q99PP9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Trim16Q99PP9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Trim16Q99PP9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.36
Trim16Q99PP9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Trim16Q99PP9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Trim16Q99PP9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Trim16Q99PP9 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Trim16Q99PP9 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC23.55■■□□□ 1.36
Trim16Q99PP9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trim16Q99PP9 Gm45855-201ENSMUST00000212546 880 ntBASIC23.54■■□□□ 1.36
Trim16Q99PP9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim16Q99PP9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim16Q99PP9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trim16Q99PP9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim16Q99PP9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim16Q99PP9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.51■■□□□ 1.35
Trim16Q99PP9 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim16Q99PP9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim16Q99PP9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.5■■□□□ 1.35
Trim16Q99PP9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Trim16Q99PP9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Trim16Q99PP9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim16Q99PP9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim16Q99PP9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trim16Q99PP9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim16Q99PP9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
Trim16Q99PP9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim16Q99PP9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim16Q99PP9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim16Q99PP9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Trim16Q99PP9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
Trim16Q99PP9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.46■■□□□ 1.35
Trim16Q99PP9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim16Q99PP9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.35
Trim16Q99PP9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Trim16Q99PP9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim16Q99PP9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim16Q99PP9 Gm24970-201ENSMUST00000175582 82 ntBASIC23.44■■□□□ 1.34
Trim16Q99PP9 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.44■■□□□ 1.34
Trim16Q99PP9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Trim16Q99PP9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.43■■□□□ 1.34
Trim16Q99PP9 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trim16Q99PP9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim16Q99PP9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trim16Q99PP9 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms