Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ubqln4Q99NB8 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Ubqln4Q99NB8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ubqln4Q99NB8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Ubqln4Q99NB8 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.51■■□□□ 1.19
Ubqln4Q99NB8 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ubqln4Q99NB8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ubqln4Q99NB8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.5■■□□□ 1.19
Ubqln4Q99NB8 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ubqln4Q99NB8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ubqln4Q99NB8 Zfp131-205ENSMUST00000223812 663 ntBASIC22.47■■□□□ 1.19
Ubqln4Q99NB8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ubqln4Q99NB8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.47■■□□□ 1.19
Ubqln4Q99NB8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubqln4Q99NB8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubqln4Q99NB8 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ubqln4Q99NB8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ubqln4Q99NB8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Ubqln4Q99NB8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Ubqln4Q99NB8 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC22.45■■□□□ 1.18
Ubqln4Q99NB8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.44■■□□□ 1.18
Ubqln4Q99NB8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Ubqln4Q99NB8 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
Ubqln4Q99NB8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ubqln4Q99NB8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ubqln4Q99NB8 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Ubqln4Q99NB8 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.42■■□□□ 1.18
Ubqln4Q99NB8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ubqln4Q99NB8 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.41■■□□□ 1.18
Ubqln4Q99NB8 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ubqln4Q99NB8 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Ubqln4Q99NB8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Ubqln4Q99NB8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubqln4Q99NB8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubqln4Q99NB8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubqln4Q99NB8 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ubqln4Q99NB8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.37■■□□□ 1.17
Ubqln4Q99NB8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
Ubqln4Q99NB8 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ubqln4Q99NB8 Tdp2-203ENSMUST00000223804 1136 ntBASIC22.35■■□□□ 1.17
Ubqln4Q99NB8 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.35■■□□□ 1.17
Ubqln4Q99NB8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ubqln4Q99NB8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.35■■□□□ 1.17
Ubqln4Q99NB8 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.34■■□□□ 1.17
Ubqln4Q99NB8 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ubqln4Q99NB8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Ubqln4Q99NB8 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.31■■□□□ 1.16
Ubqln4Q99NB8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ubqln4Q99NB8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Ubqln4Q99NB8 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.28■■□□□ 1.16
Ubqln4Q99NB8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ubqln4Q99NB8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ubqln4Q99NB8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22.27■■□□□ 1.16
Ubqln4Q99NB8 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
Ubqln4Q99NB8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubqln4Q99NB8 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ubqln4Q99NB8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ubqln4Q99NB8 Gm9397-201ENSMUST00000200125 605 ntBASIC22.24■■□□□ 1.15
Ubqln4Q99NB8 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ubqln4Q99NB8 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ubqln4Q99NB8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ubqln4Q99NB8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ubqln4Q99NB8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.23■■□□□ 1.15
Ubqln4Q99NB8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ubqln4Q99NB8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ubqln4Q99NB8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ubqln4Q99NB8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.21■■□□□ 1.15
Ubqln4Q99NB8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ubqln4Q99NB8 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.21■■□□□ 1.15
Ubqln4Q99NB8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ubqln4Q99NB8 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ubqln4Q99NB8 Amer2-203ENSMUST00000225247 2662 ntBASIC22.2■■□□□ 1.14
Ubqln4Q99NB8 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.19■■□□□ 1.14
Ubqln4Q99NB8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubqln4Q99NB8 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Ubqln4Q99NB8 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ubqln4Q99NB8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.18■■□□□ 1.14
Ubqln4Q99NB8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ubqln4Q99NB8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Ubqln4Q99NB8 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.17■■□□□ 1.14
Ubqln4Q99NB8 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.17■■□□□ 1.14
Ubqln4Q99NB8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ubqln4Q99NB8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ubqln4Q99NB8 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ubqln4Q99NB8 Gm24970-201ENSMUST00000175582 82 ntBASIC22.16■■□□□ 1.14
Ubqln4Q99NB8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
Ubqln4Q99NB8 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubqln4Q99NB8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubqln4Q99NB8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Ubqln4Q99NB8 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Ubqln4Q99NB8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Ubqln4Q99NB8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Ubqln4Q99NB8 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ubqln4Q99NB8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Ubqln4Q99NB8 Gm45855-201ENSMUST00000212546 880 ntBASIC22.14■■□□□ 1.13
Ubqln4Q99NB8 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ubqln4Q99NB8 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ubqln4Q99NB8 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ubqln4Q99NB8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Ubqln4Q99NB8 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.12■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms