Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Scrt1Q99M85 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Scrt1Q99M85 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scrt1Q99M85 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Scrt1Q99M85 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.64■■□□□ 1.05
Scrt1Q99M85 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Scrt1Q99M85 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scrt1Q99M85 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scrt1Q99M85 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Scrt1Q99M85 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.62■■□□□ 1.05
Scrt1Q99M85 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scrt1Q99M85 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scrt1Q99M85 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Scrt1Q99M85 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Scrt1Q99M85 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Scrt1Q99M85 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Scrt1Q99M85 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scrt1Q99M85 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scrt1Q99M85 Nkain2-201ENSMUST00000092602 558 ntBASIC21.59■■□□□ 1.05
Scrt1Q99M85 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scrt1Q99M85 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scrt1Q99M85 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Scrt1Q99M85 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scrt1Q99M85 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scrt1Q99M85 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Scrt1Q99M85 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Scrt1Q99M85 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.58■■□□□ 1.04
Scrt1Q99M85 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21.57■■□□□ 1.04
Scrt1Q99M85 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scrt1Q99M85 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.57■■□□□ 1.04
Scrt1Q99M85 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scrt1Q99M85 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scrt1Q99M85 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scrt1Q99M85 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.53■■□□□ 1.04
Scrt1Q99M85 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Scrt1Q99M85 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.53■■□□□ 1.04
Scrt1Q99M85 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scrt1Q99M85 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scrt1Q99M85 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.52■■□□□ 1.04
Scrt1Q99M85 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scrt1Q99M85 Gm7432-201ENSMUST00000210343 879 ntBASIC21.52■■□□□ 1.04
Scrt1Q99M85 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Scrt1Q99M85 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Scrt1Q99M85 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Scrt1Q99M85 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scrt1Q99M85 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scrt1Q99M85 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scrt1Q99M85 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scrt1Q99M85 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.5■■□□□ 1.03
Scrt1Q99M85 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scrt1Q99M85 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scrt1Q99M85 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scrt1Q99M85 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scrt1Q99M85 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.49■■□□□ 1.03
Scrt1Q99M85 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scrt1Q99M85 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scrt1Q99M85 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Scrt1Q99M85 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scrt1Q99M85 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Scrt1Q99M85 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scrt1Q99M85 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scrt1Q99M85 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scrt1Q99M85 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scrt1Q99M85 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Scrt1Q99M85 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Scrt1Q99M85 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.45■■□□□ 1.02
Scrt1Q99M85 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scrt1Q99M85 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scrt1Q99M85 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scrt1Q99M85 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Scrt1Q99M85 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scrt1Q99M85 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scrt1Q99M85 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scrt1Q99M85 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Scrt1Q99M85 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scrt1Q99M85 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.4■■□□□ 1.02
Scrt1Q99M85 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scrt1Q99M85 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.39■■□□□ 1.01
Scrt1Q99M85 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Scrt1Q99M85 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scrt1Q99M85 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Scrt1Q99M85 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scrt1Q99M85 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scrt1Q99M85 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scrt1Q99M85 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scrt1Q99M85 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scrt1Q99M85 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.36■■□□□ 1.01
Scrt1Q99M85 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scrt1Q99M85 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scrt1Q99M85 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Scrt1Q99M85 Gm11599-201ENSMUST00000118720 878 ntBASIC21.35■■□□□ 1.01
Scrt1Q99M85 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scrt1Q99M85 Gm11175-201ENSMUST00000116172 543 ntBASIC21.34■■□□□ 1.01
Scrt1Q99M85 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.34■■□□□ 1.01
Scrt1Q99M85 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Scrt1Q99M85 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scrt1Q99M85 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Scrt1Q99M85 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Scrt1Q99M85 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.33■■□□□ 1
Scrt1Q99M85 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms