Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdhb20Q91XZ9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
Pcdhb20Q91XZ9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.95■■□□□ 1.42
Pcdhb20Q91XZ9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.95■■□□□ 1.42
Pcdhb20Q91XZ9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhb20Q91XZ9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Pcdhb20Q91XZ9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Pcdhb20Q91XZ9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhb20Q91XZ9 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhb20Q91XZ9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhb20Q91XZ9 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.92■■□□□ 1.42
Pcdhb20Q91XZ9 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.92■■□□□ 1.42
Pcdhb20Q91XZ9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhb20Q91XZ9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
Pcdhb20Q91XZ9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhb20Q91XZ9 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhb20Q91XZ9 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhb20Q91XZ9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhb20Q91XZ9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhb20Q91XZ9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhb20Q91XZ9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Pcdhb20Q91XZ9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhb20Q91XZ9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb20Q91XZ9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb20Q91XZ9 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.86■■□□□ 1.41
Pcdhb20Q91XZ9 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb20Q91XZ9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb20Q91XZ9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb20Q91XZ9 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb20Q91XZ9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC23.85■■□□□ 1.41
Pcdhb20Q91XZ9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb20Q91XZ9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhb20Q91XZ9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb20Q91XZ9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb20Q91XZ9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb20Q91XZ9 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb20Q91XZ9 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.77■■□□□ 1.4
Pcdhb20Q91XZ9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb20Q91XZ9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb20Q91XZ9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb20Q91XZ9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb20Q91XZ9 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb20Q91XZ9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb20Q91XZ9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Pcdhb20Q91XZ9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.73■■□□□ 1.39
Pcdhb20Q91XZ9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb20Q91XZ9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC23.72■■□□□ 1.39
Pcdhb20Q91XZ9 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhb20Q91XZ9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.71■■□□□ 1.39
Pcdhb20Q91XZ9 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC23.7■■□□□ 1.39
Pcdhb20Q91XZ9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.7■■□□□ 1.38
Pcdhb20Q91XZ9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhb20Q91XZ9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
Pcdhb20Q91XZ9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhb20Q91XZ9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.67■■□□□ 1.38
Pcdhb20Q91XZ9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb20Q91XZ9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb20Q91XZ9 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb20Q91XZ9 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhb20Q91XZ9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb20Q91XZ9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdhb20Q91XZ9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb20Q91XZ9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhb20Q91XZ9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhb20Q91XZ9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb20Q91XZ9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhb20Q91XZ9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhb20Q91XZ9 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Pcdhb20Q91XZ9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
Pcdhb20Q91XZ9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhb20Q91XZ9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.6■■□□□ 1.37
Pcdhb20Q91XZ9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb20Q91XZ9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdhb20Q91XZ9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Pcdhb20Q91XZ9 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.56■■□□□ 1.36
Pcdhb20Q91XZ9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb20Q91XZ9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb20Q91XZ9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb20Q91XZ9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb20Q91XZ9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.54■■□□□ 1.36
Pcdhb20Q91XZ9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
Pcdhb20Q91XZ9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb20Q91XZ9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.53■■□□□ 1.36
Pcdhb20Q91XZ9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb20Q91XZ9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb20Q91XZ9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Pcdhb20Q91XZ9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb20Q91XZ9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb20Q91XZ9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb20Q91XZ9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Pcdhb20Q91XZ9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb20Q91XZ9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb20Q91XZ9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb20Q91XZ9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb20Q91XZ9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb20Q91XZ9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb20Q91XZ9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.47■■□□□ 1.35
Pcdhb20Q91XZ9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhb20Q91XZ9 Zxda-201ENSMUST00000117281 2621 ntBASIC23.46■■□□□ 1.35
Pcdhb20Q91XZ9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms