Protein–RNA interactions for Protein: Q8VHS2

Crb1, Protein crumbs homolog 1, mousemouse

Predictions only

Length 1,405 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crb1Q8VHS2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Crb1Q8VHS2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Crb1Q8VHS2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Crb1Q8VHS2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
Crb1Q8VHS2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC32.41■■■□□ 2.78
Crb1Q8VHS2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC32.4■■■□□ 2.78
Crb1Q8VHS2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Crb1Q8VHS2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Crb1Q8VHS2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Crb1Q8VHS2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
Crb1Q8VHS2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Crb1Q8VHS2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Crb1Q8VHS2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Crb1Q8VHS2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Crb1Q8VHS2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC32.35■■■□□ 2.77
Crb1Q8VHS2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Crb1Q8VHS2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC32.33■■■□□ 2.77
Crb1Q8VHS2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Crb1Q8VHS2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC32.32■■■□□ 2.76
Crb1Q8VHS2 Nkain2-201ENSMUST00000092602 558 ntBASIC32.32■■■□□ 2.76
Crb1Q8VHS2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC32.31■■■□□ 2.76
Crb1Q8VHS2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Crb1Q8VHS2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
Crb1Q8VHS2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Crb1Q8VHS2 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Crb1Q8VHS2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
Crb1Q8VHS2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Crb1Q8VHS2 Gm2415-204ENSMUST00000190235 2004 ntBASIC32.26■■■□□ 2.76
Crb1Q8VHS2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
Crb1Q8VHS2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC32.26■■■□□ 2.75
Crb1Q8VHS2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
Crb1Q8VHS2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Crb1Q8VHS2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC32.25■■■□□ 2.75
Crb1Q8VHS2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC32.24■■■□□ 2.75
Crb1Q8VHS2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Crb1Q8VHS2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Crb1Q8VHS2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
Crb1Q8VHS2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Crb1Q8VHS2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Crb1Q8VHS2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Crb1Q8VHS2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Crb1Q8VHS2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC32.18■■■□□ 2.74
Crb1Q8VHS2 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Crb1Q8VHS2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC32.15■■■□□ 2.74
Crb1Q8VHS2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Crb1Q8VHS2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Crb1Q8VHS2 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Crb1Q8VHS2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Crb1Q8VHS2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Crb1Q8VHS2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Crb1Q8VHS2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Crb1Q8VHS2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC32.05■■■□□ 2.72
Crb1Q8VHS2 Gm7432-201ENSMUST00000210343 879 ntBASIC32.04■■■□□ 2.72
Crb1Q8VHS2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Crb1Q8VHS2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC32.03■■■□□ 2.72
Crb1Q8VHS2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Crb1Q8VHS2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.72
Crb1Q8VHS2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC32■■■□□ 2.71
Crb1Q8VHS2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Crb1Q8VHS2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC31.99■■■□□ 2.71
Crb1Q8VHS2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Crb1Q8VHS2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.99■■■□□ 2.71
Crb1Q8VHS2 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.98■■■□□ 2.71
Crb1Q8VHS2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.94■■■□□ 2.7
Crb1Q8VHS2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Crb1Q8VHS2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Crb1Q8VHS2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
Crb1Q8VHS2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
Crb1Q8VHS2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.92■■■□□ 2.7
Crb1Q8VHS2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Crb1Q8VHS2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Crb1Q8VHS2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Crb1Q8VHS2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Crb1Q8VHS2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Crb1Q8VHS2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31.88■■■□□ 2.69
Crb1Q8VHS2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Crb1Q8VHS2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.88■■■□□ 2.69
Crb1Q8VHS2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Crb1Q8VHS2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
Crb1Q8VHS2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Crb1Q8VHS2 Gm11599-201ENSMUST00000118720 878 ntBASIC31.85■■■□□ 2.69
Crb1Q8VHS2 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Crb1Q8VHS2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Crb1Q8VHS2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Crb1Q8VHS2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
Crb1Q8VHS2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Crb1Q8VHS2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Crb1Q8VHS2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.81■■■□□ 2.68
Crb1Q8VHS2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.81■■■□□ 2.68
Crb1Q8VHS2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC31.8■■■□□ 2.68
Crb1Q8VHS2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.79■■■□□ 2.68
Crb1Q8VHS2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Crb1Q8VHS2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.78■■■□□ 2.68
Crb1Q8VHS2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Crb1Q8VHS2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.78■■■□□ 2.68
Crb1Q8VHS2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
Crb1Q8VHS2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC31.76■■■□□ 2.68
Crb1Q8VHS2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC31.76■■■□□ 2.68
Crb1Q8VHS2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Crb1Q8VHS2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms