Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh18Q8VHR0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh18Q8VHR0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Pcdh18Q8VHR0 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh18Q8VHR0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh18Q8VHR0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh18Q8VHR0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdh18Q8VHR0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Pcdh18Q8VHR0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdh18Q8VHR0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
Pcdh18Q8VHR0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh18Q8VHR0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Pcdh18Q8VHR0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdh18Q8VHR0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdh18Q8VHR0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdh18Q8VHR0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh18Q8VHR0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh18Q8VHR0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh18Q8VHR0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdh18Q8VHR0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdh18Q8VHR0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.44■■□□□ 1.34
Pcdh18Q8VHR0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Pcdh18Q8VHR0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdh18Q8VHR0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcdh18Q8VHR0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdh18Q8VHR0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdh18Q8VHR0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdh18Q8VHR0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcdh18Q8VHR0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdh18Q8VHR0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdh18Q8VHR0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Pcdh18Q8VHR0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Pcdh18Q8VHR0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Pcdh18Q8VHR0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdh18Q8VHR0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdh18Q8VHR0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.39■■□□□ 1.33
Pcdh18Q8VHR0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Pcdh18Q8VHR0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Pcdh18Q8VHR0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
Pcdh18Q8VHR0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdh18Q8VHR0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdh18Q8VHR0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdh18Q8VHR0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Pcdh18Q8VHR0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.36■■□□□ 1.33
Pcdh18Q8VHR0 Peli2-204ENSMUST00000226513 1320 ntBASIC23.35■■□□□ 1.33
Pcdh18Q8VHR0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdh18Q8VHR0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdh18Q8VHR0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.33■■□□□ 1.33
Pcdh18Q8VHR0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.33■■□□□ 1.33
Pcdh18Q8VHR0 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.33■■□□□ 1.33
Pcdh18Q8VHR0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdh18Q8VHR0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdh18Q8VHR0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Pcdh18Q8VHR0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
Pcdh18Q8VHR0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh18Q8VHR0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Pcdh18Q8VHR0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdh18Q8VHR0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdh18Q8VHR0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pcdh18Q8VHR0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Pcdh18Q8VHR0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdh18Q8VHR0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Pcdh18Q8VHR0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Pcdh18Q8VHR0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdh18Q8VHR0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.25■■□□□ 1.31
Pcdh18Q8VHR0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Pcdh18Q8VHR0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdh18Q8VHR0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh18Q8VHR0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh18Q8VHR0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh18Q8VHR0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh18Q8VHR0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh18Q8VHR0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdh18Q8VHR0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdh18Q8VHR0 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcdh18Q8VHR0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.19■■□□□ 1.3
Pcdh18Q8VHR0 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.19■■□□□ 1.3
Pcdh18Q8VHR0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdh18Q8VHR0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.18■■□□□ 1.3
Pcdh18Q8VHR0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdh18Q8VHR0 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.18■■□□□ 1.3
Pcdh18Q8VHR0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdh18Q8VHR0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdh18Q8VHR0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdh18Q8VHR0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Pcdh18Q8VHR0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdh18Q8VHR0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Pcdh18Q8VHR0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh18Q8VHR0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh18Q8VHR0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdh18Q8VHR0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdh18Q8VHR0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdh18Q8VHR0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdh18Q8VHR0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.15■■□□□ 1.3
Pcdh18Q8VHR0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdh18Q8VHR0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdh18Q8VHR0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Pcdh18Q8VHR0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Pcdh18Q8VHR0 Gm24804-201ENSMUST00000174982 85 ntBASIC23.13■■□□□ 1.29
Pcdh18Q8VHR0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms