Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Ddx39aQ8VDW0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ddx39aQ8VDW0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Ddx39aQ8VDW0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Ddx39aQ8VDW0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Ddx39aQ8VDW0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ddx39aQ8VDW0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Ddx39aQ8VDW0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Ddx39aQ8VDW0 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
Ddx39aQ8VDW0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Ddx39aQ8VDW0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
Ddx39aQ8VDW0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
Ddx39aQ8VDW0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ddx39aQ8VDW0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Ddx39aQ8VDW0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Ddx39aQ8VDW0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Ddx39aQ8VDW0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Ddx39aQ8VDW0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ddx39aQ8VDW0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.82■■■□□ 2.04
Ddx39aQ8VDW0 Gm6821-201ENSMUST00000107540 542 ntBASIC27.82■■■□□ 2.04
Ddx39aQ8VDW0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.82■■■□□ 2.04
Ddx39aQ8VDW0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Ddx39aQ8VDW0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
Ddx39aQ8VDW0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Ddx39aQ8VDW0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.79■■■□□ 2.04
Ddx39aQ8VDW0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
Ddx39aQ8VDW0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ddx39aQ8VDW0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Ddx39aQ8VDW0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.04
Ddx39aQ8VDW0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Ddx39aQ8VDW0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Ddx39aQ8VDW0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Ddx39aQ8VDW0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Ddx39aQ8VDW0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Ddx39aQ8VDW0 Gm8503-201ENSMUST00000118131 455 ntBASIC27.74■■■□□ 2.03
Ddx39aQ8VDW0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.74■■■□□ 2.03
Ddx39aQ8VDW0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Ddx39aQ8VDW0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Ddx39aQ8VDW0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ddx39aQ8VDW0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ddx39aQ8VDW0 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Ddx39aQ8VDW0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Ddx39aQ8VDW0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Ddx39aQ8VDW0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Ddx39aQ8VDW0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Ddx39aQ8VDW0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.7■■■□□ 2.02
Ddx39aQ8VDW0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ddx39aQ8VDW0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Ddx39aQ8VDW0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.67■■■□□ 2.02
Ddx39aQ8VDW0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Ddx39aQ8VDW0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Ddx39aQ8VDW0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Ddx39aQ8VDW0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Ddx39aQ8VDW0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Ddx39aQ8VDW0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27.64■■■□□ 2.02
Ddx39aQ8VDW0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ddx39aQ8VDW0 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.63■■■□□ 2.01
Ddx39aQ8VDW0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Ddx39aQ8VDW0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Ddx39aQ8VDW0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.62■■■□□ 2.01
Ddx39aQ8VDW0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Ddx39aQ8VDW0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Ddx39aQ8VDW0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Ddx39aQ8VDW0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.56■■■□□ 2
Ddx39aQ8VDW0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC27.55■■■□□ 2
Ddx39aQ8VDW0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
Ddx39aQ8VDW0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.54■■■□□ 2
Ddx39aQ8VDW0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.54■■■□□ 2
Ddx39aQ8VDW0 Nkain2-201ENSMUST00000092602 558 ntBASIC27.54■■■□□ 2
Ddx39aQ8VDW0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Ddx39aQ8VDW0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Ddx39aQ8VDW0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.52■■■□□ 2
Ddx39aQ8VDW0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Ddx39aQ8VDW0 Gm5987-201ENSMUST00000196433 1151 ntBASIC27.51■■□□□ 1.99
Ddx39aQ8VDW0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.51■■□□□ 1.99
Ddx39aQ8VDW0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
Ddx39aQ8VDW0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC27.49■■□□□ 1.99
Ddx39aQ8VDW0 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.49■■□□□ 1.99
Ddx39aQ8VDW0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.48■■□□□ 1.99
Ddx39aQ8VDW0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Ddx39aQ8VDW0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.47■■□□□ 1.99
Ddx39aQ8VDW0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Ddx39aQ8VDW0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Ddx39aQ8VDW0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.46■■□□□ 1.99
Ddx39aQ8VDW0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Ddx39aQ8VDW0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Ddx39aQ8VDW0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Ddx39aQ8VDW0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.44■■□□□ 1.98
Ddx39aQ8VDW0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ddx39aQ8VDW0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.44■■□□□ 1.98
Ddx39aQ8VDW0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Ddx39aQ8VDW0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.42■■□□□ 1.98
Ddx39aQ8VDW0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC27.42■■□□□ 1.98
Ddx39aQ8VDW0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Ddx39aQ8VDW0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Ddx39aQ8VDW0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ddx39aQ8VDW0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.4■■□□□ 1.98
Ddx39aQ8VDW0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Ddx39aQ8VDW0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Ddx39aQ8VDW0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.39■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms