Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
Cacnb1Q8R3Z5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.56■■■□□ 2
Cacnb1Q8R3Z5 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.55■■■□□ 2
Cacnb1Q8R3Z5 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.55■■■□□ 2
Cacnb1Q8R3Z5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
Cacnb1Q8R3Z5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC27.55■■■□□ 2
Cacnb1Q8R3Z5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Cacnb1Q8R3Z5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Cacnb1Q8R3Z5 Gm43445-201ENSMUST00000198564 2091 ntBASIC27.53■■■□□ 2
Cacnb1Q8R3Z5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC27.53■■■□□ 2
Cacnb1Q8R3Z5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC27.53■■■□□ 2
Cacnb1Q8R3Z5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
Cacnb1Q8R3Z5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Cacnb1Q8R3Z5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Cacnb1Q8R3Z5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.5■■□□□ 1.99
Cacnb1Q8R3Z5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.5■■□□□ 1.99
Cacnb1Q8R3Z5 Gm9397-201ENSMUST00000200125 605 ntBASIC27.48■■□□□ 1.99
Cacnb1Q8R3Z5 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Cacnb1Q8R3Z5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Cacnb1Q8R3Z5 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.47■■□□□ 1.99
Cacnb1Q8R3Z5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Cacnb1Q8R3Z5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Cacnb1Q8R3Z5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.46■■□□□ 1.99
Cacnb1Q8R3Z5 Gm45855-201ENSMUST00000212546 880 ntBASIC27.46■■□□□ 1.99
Cacnb1Q8R3Z5 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Cacnb1Q8R3Z5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Cacnb1Q8R3Z5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Cacnb1Q8R3Z5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.43■■□□□ 1.98
Cacnb1Q8R3Z5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Cacnb1Q8R3Z5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC27.41■■□□□ 1.98
Cacnb1Q8R3Z5 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.41■■□□□ 1.98
Cacnb1Q8R3Z5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Cacnb1Q8R3Z5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Cacnb1Q8R3Z5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Cacnb1Q8R3Z5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Cacnb1Q8R3Z5 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Cacnb1Q8R3Z5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Cacnb1Q8R3Z5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.37■■□□□ 1.97
Cacnb1Q8R3Z5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.36■■□□□ 1.97
Cacnb1Q8R3Z5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Cacnb1Q8R3Z5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cacnb1Q8R3Z5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Cacnb1Q8R3Z5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cacnb1Q8R3Z5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Cacnb1Q8R3Z5 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.33■■□□□ 1.97
Cacnb1Q8R3Z5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cacnb1Q8R3Z5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Cacnb1Q8R3Z5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Cacnb1Q8R3Z5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
Cacnb1Q8R3Z5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Cacnb1Q8R3Z5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cacnb1Q8R3Z5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cacnb1Q8R3Z5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Cacnb1Q8R3Z5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Cacnb1Q8R3Z5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
Cacnb1Q8R3Z5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27.29■■□□□ 1.96
Cacnb1Q8R3Z5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Cacnb1Q8R3Z5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC27.28■■□□□ 1.96
Cacnb1Q8R3Z5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Cacnb1Q8R3Z5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cacnb1Q8R3Z5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.27■■□□□ 1.96
Cacnb1Q8R3Z5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cacnb1Q8R3Z5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.26■■□□□ 1.96
Cacnb1Q8R3Z5 Amer2-203ENSMUST00000225247 2662 ntBASIC27.26■■□□□ 1.96
Cacnb1Q8R3Z5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cacnb1Q8R3Z5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cacnb1Q8R3Z5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC27.25■■□□□ 1.95
Cacnb1Q8R3Z5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
Cacnb1Q8R3Z5 Gm24970-201ENSMUST00000175582 82 ntBASIC27.24■■□□□ 1.95
Cacnb1Q8R3Z5 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC27.24■■□□□ 1.95
Cacnb1Q8R3Z5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Cacnb1Q8R3Z5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cacnb1Q8R3Z5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.23■■□□□ 1.95
Cacnb1Q8R3Z5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Cacnb1Q8R3Z5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Cacnb1Q8R3Z5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cacnb1Q8R3Z5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cacnb1Q8R3Z5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Cacnb1Q8R3Z5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cacnb1Q8R3Z5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
Cacnb1Q8R3Z5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Cacnb1Q8R3Z5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Cacnb1Q8R3Z5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cacnb1Q8R3Z5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cacnb1Q8R3Z5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.18■■□□□ 1.94
Cacnb1Q8R3Z5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.18■■□□□ 1.94
Cacnb1Q8R3Z5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cacnb1Q8R3Z5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.17■■□□□ 1.94
Cacnb1Q8R3Z5 AC157572.2-201ENSMUST00000226970 908 ntBASIC27.16■■□□□ 1.94
Cacnb1Q8R3Z5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cacnb1Q8R3Z5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cacnb1Q8R3Z5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cacnb1Q8R3Z5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.14■■□□□ 1.94
Cacnb1Q8R3Z5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Cacnb1Q8R3Z5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Cacnb1Q8R3Z5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cacnb1Q8R3Z5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cacnb1Q8R3Z5 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cacnb1Q8R3Z5 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cacnb1Q8R3Z5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms