Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
Pspc1Q8R326 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Pspc1Q8R326 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Pspc1Q8R326 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Pspc1Q8R326 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Pspc1Q8R326 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.91■■■□□ 2.22
Pspc1Q8R326 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.91■■■□□ 2.22
Pspc1Q8R326 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Pspc1Q8R326 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.89■■■□□ 2.22
Pspc1Q8R326 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Pspc1Q8R326 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Pspc1Q8R326 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
Pspc1Q8R326 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Pspc1Q8R326 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Pspc1Q8R326 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Pspc1Q8R326 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Pspc1Q8R326 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.86■■■□□ 2.21
Pspc1Q8R326 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Pspc1Q8R326 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Pspc1Q8R326 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC28.83■■■□□ 2.21
Pspc1Q8R326 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pspc1Q8R326 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Pspc1Q8R326 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
Pspc1Q8R326 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Pspc1Q8R326 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Pspc1Q8R326 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Pspc1Q8R326 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pspc1Q8R326 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pspc1Q8R326 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pspc1Q8R326 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
Pspc1Q8R326 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pspc1Q8R326 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Pspc1Q8R326 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Pspc1Q8R326 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
Pspc1Q8R326 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pspc1Q8R326 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pspc1Q8R326 Gm8503-201ENSMUST00000118131 455 ntBASIC28.74■■■□□ 2.19
Pspc1Q8R326 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.74■■■□□ 2.19
Pspc1Q8R326 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Pspc1Q8R326 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.73■■■□□ 2.19
Pspc1Q8R326 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Pspc1Q8R326 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pspc1Q8R326 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.19
Pspc1Q8R326 Gm6821-201ENSMUST00000107540 542 ntBASIC28.7■■■□□ 2.18
Pspc1Q8R326 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.69■■■□□ 2.18
Pspc1Q8R326 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.69■■■□□ 2.18
Pspc1Q8R326 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Pspc1Q8R326 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Pspc1Q8R326 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Pspc1Q8R326 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Pspc1Q8R326 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Pspc1Q8R326 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Pspc1Q8R326 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Pspc1Q8R326 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Pspc1Q8R326 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.63■■■□□ 2.17
Pspc1Q8R326 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Pspc1Q8R326 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Pspc1Q8R326 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
Pspc1Q8R326 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Pspc1Q8R326 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Pspc1Q8R326 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
Pspc1Q8R326 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Pspc1Q8R326 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
Pspc1Q8R326 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
Pspc1Q8R326 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Pspc1Q8R326 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Pspc1Q8R326 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.58■■■□□ 2.17
Pspc1Q8R326 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.57■■■□□ 2.16
Pspc1Q8R326 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Pspc1Q8R326 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Pspc1Q8R326 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Pspc1Q8R326 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Pspc1Q8R326 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Pspc1Q8R326 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Pspc1Q8R326 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.55■■■□□ 2.16
Pspc1Q8R326 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Pspc1Q8R326 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Pspc1Q8R326 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Pspc1Q8R326 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Pspc1Q8R326 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Pspc1Q8R326 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Pspc1Q8R326 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pspc1Q8R326 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Pspc1Q8R326 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.46■■■□□ 2.15
Pspc1Q8R326 Nkain2-201ENSMUST00000092602 558 ntBASIC28.46■■■□□ 2.15
Pspc1Q8R326 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Pspc1Q8R326 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Pspc1Q8R326 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.43■■■□□ 2.14
Pspc1Q8R326 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.43■■■□□ 2.14
Pspc1Q8R326 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.43■■■□□ 2.14
Pspc1Q8R326 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC28.42■■■□□ 2.14
Pspc1Q8R326 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Pspc1Q8R326 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.42■■■□□ 2.14
Pspc1Q8R326 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.41■■■□□ 2.14
Pspc1Q8R326 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Pspc1Q8R326 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Pspc1Q8R326 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Pspc1Q8R326 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
Pspc1Q8R326 Zxda-201ENSMUST00000117281 2621 ntBASIC28.38■■■□□ 2.13
Pspc1Q8R326 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms