Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Vopp1Q8R1C3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
Vopp1Q8R1C3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Vopp1Q8R1C3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Vopp1Q8R1C3 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Vopp1Q8R1C3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Vopp1Q8R1C3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Vopp1Q8R1C3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Vopp1Q8R1C3 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Vopp1Q8R1C3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Vopp1Q8R1C3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Vopp1Q8R1C3 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.29■■□□□ 1.96
Vopp1Q8R1C3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Vopp1Q8R1C3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.28■■□□□ 1.96
Vopp1Q8R1C3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Vopp1Q8R1C3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Vopp1Q8R1C3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Vopp1Q8R1C3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Vopp1Q8R1C3 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Vopp1Q8R1C3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
Vopp1Q8R1C3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Vopp1Q8R1C3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
Vopp1Q8R1C3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Vopp1Q8R1C3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.22■■□□□ 1.95
Vopp1Q8R1C3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Vopp1Q8R1C3 Gm8503-201ENSMUST00000118131 455 ntBASIC27.21■■□□□ 1.95
Vopp1Q8R1C3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Vopp1Q8R1C3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Vopp1Q8R1C3 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.18■■□□□ 1.94
Vopp1Q8R1C3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Vopp1Q8R1C3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
Vopp1Q8R1C3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Vopp1Q8R1C3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Vopp1Q8R1C3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Vopp1Q8R1C3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Vopp1Q8R1C3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Vopp1Q8R1C3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Vopp1Q8R1C3 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Vopp1Q8R1C3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Vopp1Q8R1C3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Vopp1Q8R1C3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Vopp1Q8R1C3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.13■■□□□ 1.93
Vopp1Q8R1C3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Vopp1Q8R1C3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
Vopp1Q8R1C3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC27.12■■□□□ 1.93
Vopp1Q8R1C3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Vopp1Q8R1C3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
Vopp1Q8R1C3 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Vopp1Q8R1C3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
Vopp1Q8R1C3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Vopp1Q8R1C3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.11■■□□□ 1.93
Vopp1Q8R1C3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Vopp1Q8R1C3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Vopp1Q8R1C3 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.07■■□□□ 1.92
Vopp1Q8R1C3 Gm6821-201ENSMUST00000107540 542 ntBASIC27.05■■□□□ 1.92
Vopp1Q8R1C3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Vopp1Q8R1C3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Vopp1Q8R1C3 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Vopp1Q8R1C3 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.01■■□□□ 1.92
Vopp1Q8R1C3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.01■■□□□ 1.91
Vopp1Q8R1C3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Vopp1Q8R1C3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Vopp1Q8R1C3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
Vopp1Q8R1C3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Vopp1Q8R1C3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.97■■□□□ 1.91
Vopp1Q8R1C3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Vopp1Q8R1C3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.97■■□□□ 1.91
Vopp1Q8R1C3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC26.97■■□□□ 1.91
Vopp1Q8R1C3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Vopp1Q8R1C3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.94■■□□□ 1.9
Vopp1Q8R1C3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Vopp1Q8R1C3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Vopp1Q8R1C3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Vopp1Q8R1C3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Vopp1Q8R1C3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Vopp1Q8R1C3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Vopp1Q8R1C3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Vopp1Q8R1C3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Vopp1Q8R1C3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Vopp1Q8R1C3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Vopp1Q8R1C3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.9■■□□□ 1.9
Vopp1Q8R1C3 Nkain2-201ENSMUST00000092602 558 ntBASIC26.9■■□□□ 1.9
Vopp1Q8R1C3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Vopp1Q8R1C3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Vopp1Q8R1C3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.88■■□□□ 1.89
Vopp1Q8R1C3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.88■■□□□ 1.89
Vopp1Q8R1C3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Vopp1Q8R1C3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Vopp1Q8R1C3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.86■■□□□ 1.89
Vopp1Q8R1C3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.85■■□□□ 1.89
Vopp1Q8R1C3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Vopp1Q8R1C3 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.82■■□□□ 1.88
Vopp1Q8R1C3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Vopp1Q8R1C3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Vopp1Q8R1C3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Vopp1Q8R1C3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
Vopp1Q8R1C3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
Vopp1Q8R1C3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.79■■□□□ 1.88
Vopp1Q8R1C3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.79■■□□□ 1.88
Vopp1Q8R1C3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms