Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Alms1Q8K4E0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.73■■□□□ 1.55
Alms1Q8K4E0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.72■■□□□ 1.55
Alms1Q8K4E0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
Alms1Q8K4E0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Alms1Q8K4E0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Alms1Q8K4E0 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
Alms1Q8K4E0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Alms1Q8K4E0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.68■■□□□ 1.54
Alms1Q8K4E0 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Alms1Q8K4E0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
Alms1Q8K4E0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Alms1Q8K4E0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Alms1Q8K4E0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC24.66■■□□□ 1.54
Alms1Q8K4E0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Alms1Q8K4E0 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Alms1Q8K4E0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Alms1Q8K4E0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Alms1Q8K4E0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24.62■■□□□ 1.53
Alms1Q8K4E0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Alms1Q8K4E0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Alms1Q8K4E0 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Alms1Q8K4E0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.61■■□□□ 1.53
Alms1Q8K4E0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Alms1Q8K4E0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Alms1Q8K4E0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Alms1Q8K4E0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Alms1Q8K4E0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Alms1Q8K4E0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.6■■□□□ 1.53
Alms1Q8K4E0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Alms1Q8K4E0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC24.58■■□□□ 1.53
Alms1Q8K4E0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.57■■□□□ 1.52
Alms1Q8K4E0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Alms1Q8K4E0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Alms1Q8K4E0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.56■■□□□ 1.52
Alms1Q8K4E0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Alms1Q8K4E0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Alms1Q8K4E0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC24.53■■□□□ 1.52
Alms1Q8K4E0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Alms1Q8K4E0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24.52■■□□□ 1.52
Alms1Q8K4E0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Alms1Q8K4E0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Alms1Q8K4E0 Gm7432-201ENSMUST00000210343 879 ntBASIC24.51■■□□□ 1.51
Alms1Q8K4E0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Alms1Q8K4E0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Alms1Q8K4E0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Alms1Q8K4E0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Alms1Q8K4E0 Mir6538-201ENSMUST00000183713 110 ntBASIC24.5■■□□□ 1.51
Alms1Q8K4E0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Alms1Q8K4E0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
Alms1Q8K4E0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Alms1Q8K4E0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.47■■□□□ 1.51
Alms1Q8K4E0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Alms1Q8K4E0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Alms1Q8K4E0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC24.46■■□□□ 1.51
Alms1Q8K4E0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Alms1Q8K4E0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Alms1Q8K4E0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
Alms1Q8K4E0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Alms1Q8K4E0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Alms1Q8K4E0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Alms1Q8K4E0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.44■■□□□ 1.5
Alms1Q8K4E0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Alms1Q8K4E0 Nkain2-201ENSMUST00000092602 558 ntBASIC24.42■■□□□ 1.5
Alms1Q8K4E0 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Alms1Q8K4E0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.41■■□□□ 1.5
Alms1Q8K4E0 Gm11175-201ENSMUST00000116172 543 ntBASIC24.4■■□□□ 1.5
Alms1Q8K4E0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Alms1Q8K4E0 Gm11599-201ENSMUST00000118720 878 ntBASIC24.4■■□□□ 1.5
Alms1Q8K4E0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Alms1Q8K4E0 Cap2-205ENSMUST00000225824 1634 ntBASIC24.39■■□□□ 1.49
Alms1Q8K4E0 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Alms1Q8K4E0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
Alms1Q8K4E0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Alms1Q8K4E0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.37■■□□□ 1.49
Alms1Q8K4E0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Alms1Q8K4E0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Alms1Q8K4E0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Alms1Q8K4E0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Alms1Q8K4E0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Alms1Q8K4E0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Alms1Q8K4E0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Alms1Q8K4E0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Alms1Q8K4E0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Alms1Q8K4E0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Alms1Q8K4E0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Alms1Q8K4E0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Alms1Q8K4E0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Alms1Q8K4E0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Alms1Q8K4E0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Alms1Q8K4E0 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Alms1Q8K4E0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Alms1Q8K4E0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Alms1Q8K4E0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Alms1Q8K4E0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Alms1Q8K4E0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Alms1Q8K4E0 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.28■■□□□ 1.48
Alms1Q8K4E0 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Alms1Q8K4E0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Alms1Q8K4E0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 180.5 ms