Protein–RNA interactions for Protein: Q8K375

Lrrc56, Leucine-rich repeat-containing protein 56, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc56Q8K375 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Lrrc56Q8K375 Gm30346-201ENSMUST00000218641 1699 ntBASIC28.26■■■□□ 2.11
Lrrc56Q8K375 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Lrrc56Q8K375 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Lrrc56Q8K375 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.23■■■□□ 2.11
Lrrc56Q8K375 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC28.22■■■□□ 2.11
Lrrc56Q8K375 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Lrrc56Q8K375 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Lrrc56Q8K375 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Lrrc56Q8K375 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Lrrc56Q8K375 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Lrrc56Q8K375 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Lrrc56Q8K375 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Lrrc56Q8K375 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.17■■■□□ 2.1
Lrrc56Q8K375 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Lrrc56Q8K375 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.16■■■□□ 2.1
Lrrc56Q8K375 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Lrrc56Q8K375 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Lrrc56Q8K375 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Lrrc56Q8K375 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Lrrc56Q8K375 Nkain2-201ENSMUST00000092602 558 ntBASIC28.14■■■□□ 2.1
Lrrc56Q8K375 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Lrrc56Q8K375 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Lrrc56Q8K375 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
Lrrc56Q8K375 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
Lrrc56Q8K375 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Lrrc56Q8K375 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC28.1■■■□□ 2.09
Lrrc56Q8K375 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Lrrc56Q8K375 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Lrrc56Q8K375 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.07■■■□□ 2.08
Lrrc56Q8K375 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Lrrc56Q8K375 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Lrrc56Q8K375 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.06■■■□□ 2.08
Lrrc56Q8K375 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Lrrc56Q8K375 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Lrrc56Q8K375 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Lrrc56Q8K375 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Lrrc56Q8K375 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Lrrc56Q8K375 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Lrrc56Q8K375 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Lrrc56Q8K375 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
Lrrc56Q8K375 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.01■■■□□ 2.07
Lrrc56Q8K375 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28■■■□□ 2.07
Lrrc56Q8K375 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28■■■□□ 2.07
Lrrc56Q8K375 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.97■■■□□ 2.07
Lrrc56Q8K375 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Lrrc56Q8K375 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Lrrc56Q8K375 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Lrrc56Q8K375 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Lrrc56Q8K375 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Lrrc56Q8K375 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
Lrrc56Q8K375 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.93■■■□□ 2.06
Lrrc56Q8K375 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Lrrc56Q8K375 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Lrrc56Q8K375 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.93■■■□□ 2.06
Lrrc56Q8K375 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Lrrc56Q8K375 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Lrrc56Q8K375 Gm7432-201ENSMUST00000210343 879 ntBASIC27.9■■■□□ 2.06
Lrrc56Q8K375 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.9■■■□□ 2.06
Lrrc56Q8K375 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
Lrrc56Q8K375 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Lrrc56Q8K375 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Lrrc56Q8K375 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
Lrrc56Q8K375 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.85■■■□□ 2.05
Lrrc56Q8K375 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Lrrc56Q8K375 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Lrrc56Q8K375 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
Lrrc56Q8K375 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Lrrc56Q8K375 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
Lrrc56Q8K375 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.81■■■□□ 2.04
Lrrc56Q8K375 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Lrrc56Q8K375 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Lrrc56Q8K375 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Lrrc56Q8K375 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Lrrc56Q8K375 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Lrrc56Q8K375 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
Lrrc56Q8K375 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Lrrc56Q8K375 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.77■■■□□ 2.04
Lrrc56Q8K375 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC27.77■■■□□ 2.04
Lrrc56Q8K375 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Lrrc56Q8K375 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Lrrc56Q8K375 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
Lrrc56Q8K375 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
Lrrc56Q8K375 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Lrrc56Q8K375 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Lrrc56Q8K375 Gm11599-201ENSMUST00000118720 878 ntBASIC27.7■■■□□ 2.02
Lrrc56Q8K375 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Lrrc56Q8K375 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Lrrc56Q8K375 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.69■■■□□ 2.02
Lrrc56Q8K375 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.68■■■□□ 2.02
Lrrc56Q8K375 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Lrrc56Q8K375 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.67■■■□□ 2.02
Lrrc56Q8K375 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.66■■■□□ 2.02
Lrrc56Q8K375 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Lrrc56Q8K375 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Lrrc56Q8K375 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.65■■■□□ 2.02
Lrrc56Q8K375 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.64■■■□□ 2.02
Lrrc56Q8K375 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.63■■■□□ 2.01
Lrrc56Q8K375 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.62■■■□□ 2.01
Lrrc56Q8K375 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms