Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC29.91■■■□□ 2.38
Shtn1Q8K2Q9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
Shtn1Q8K2Q9 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Shtn1Q8K2Q9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Shtn1Q8K2Q9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.86■■■□□ 2.37
Shtn1Q8K2Q9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
Shtn1Q8K2Q9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
Shtn1Q8K2Q9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Shtn1Q8K2Q9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
Shtn1Q8K2Q9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Shtn1Q8K2Q9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Shtn1Q8K2Q9 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Shtn1Q8K2Q9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.37
Shtn1Q8K2Q9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Shtn1Q8K2Q9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Shtn1Q8K2Q9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Shtn1Q8K2Q9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
Shtn1Q8K2Q9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Shtn1Q8K2Q9 Gm7432-201ENSMUST00000210343 879 ntBASIC29.78■■■□□ 2.36
Shtn1Q8K2Q9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Shtn1Q8K2Q9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Shtn1Q8K2Q9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29.76■■■□□ 2.35
Shtn1Q8K2Q9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Shtn1Q8K2Q9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.74■■■□□ 2.35
Shtn1Q8K2Q9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.74■■■□□ 2.35
Shtn1Q8K2Q9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Shtn1Q8K2Q9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
Shtn1Q8K2Q9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Shtn1Q8K2Q9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.72■■■□□ 2.35
Shtn1Q8K2Q9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Shtn1Q8K2Q9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Shtn1Q8K2Q9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Shtn1Q8K2Q9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29.7■■■□□ 2.35
Shtn1Q8K2Q9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
Shtn1Q8K2Q9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Shtn1Q8K2Q9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Shtn1Q8K2Q9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Shtn1Q8K2Q9 Gm30346-201ENSMUST00000218641 1699 ntBASIC29.66■■■□□ 2.34
Shtn1Q8K2Q9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Shtn1Q8K2Q9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Shtn1Q8K2Q9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29.64■■■□□ 2.34
Shtn1Q8K2Q9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Shtn1Q8K2Q9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29.63■■■□□ 2.33
Shtn1Q8K2Q9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Shtn1Q8K2Q9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Shtn1Q8K2Q9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Shtn1Q8K2Q9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Shtn1Q8K2Q9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Shtn1Q8K2Q9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Shtn1Q8K2Q9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Shtn1Q8K2Q9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC29.6■■■□□ 2.33
Shtn1Q8K2Q9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
Shtn1Q8K2Q9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Shtn1Q8K2Q9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Shtn1Q8K2Q9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
Shtn1Q8K2Q9 Gm11175-201ENSMUST00000116172 543 ntBASIC29.57■■■□□ 2.32
Shtn1Q8K2Q9 Gm11599-201ENSMUST00000118720 878 ntBASIC29.57■■■□□ 2.32
Shtn1Q8K2Q9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC29.57■■■□□ 2.32
Shtn1Q8K2Q9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Shtn1Q8K2Q9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Shtn1Q8K2Q9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Shtn1Q8K2Q9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.54■■■□□ 2.32
Shtn1Q8K2Q9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
Shtn1Q8K2Q9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Shtn1Q8K2Q9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Shtn1Q8K2Q9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Shtn1Q8K2Q9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Shtn1Q8K2Q9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Shtn1Q8K2Q9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Shtn1Q8K2Q9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
Shtn1Q8K2Q9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC29.48■■■□□ 2.31
Shtn1Q8K2Q9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC29.48■■■□□ 2.31
Shtn1Q8K2Q9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29.48■■■□□ 2.31
Shtn1Q8K2Q9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Shtn1Q8K2Q9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Shtn1Q8K2Q9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Shtn1Q8K2Q9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Shtn1Q8K2Q9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Shtn1Q8K2Q9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29.43■■■□□ 2.3
Shtn1Q8K2Q9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC29.43■■■□□ 2.3
Shtn1Q8K2Q9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
Shtn1Q8K2Q9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Shtn1Q8K2Q9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC29.42■■■□□ 2.3
Shtn1Q8K2Q9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Shtn1Q8K2Q9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Shtn1Q8K2Q9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
Shtn1Q8K2Q9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Shtn1Q8K2Q9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Shtn1Q8K2Q9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Shtn1Q8K2Q9 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
Shtn1Q8K2Q9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
Shtn1Q8K2Q9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
Shtn1Q8K2Q9 Mir6538-201ENSMUST00000183713 110 ntBASIC29.34■■■□□ 2.29
Shtn1Q8K2Q9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Shtn1Q8K2Q9 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.33■■■□□ 2.29
Shtn1Q8K2Q9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
Shtn1Q8K2Q9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
Shtn1Q8K2Q9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29.32■■■□□ 2.28
Shtn1Q8K2Q9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29.32■■■□□ 2.28
Shtn1Q8K2Q9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29.3■■■□□ 2.28
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms