Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trim68Q8K243 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Trim68Q8K243 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Trim68Q8K243 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Trim68Q8K243 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Trim68Q8K243 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
Trim68Q8K243 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Trim68Q8K243 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Trim68Q8K243 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim68Q8K243 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Trim68Q8K243 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.62■■□□□ 1.85
Trim68Q8K243 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.62■■□□□ 1.85
Trim68Q8K243 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Trim68Q8K243 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Trim68Q8K243 Nkain2-201ENSMUST00000092602 558 ntBASIC26.61■■□□□ 1.85
Trim68Q8K243 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trim68Q8K243 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Trim68Q8K243 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim68Q8K243 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Trim68Q8K243 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Trim68Q8K243 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.57■■□□□ 1.84
Trim68Q8K243 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
Trim68Q8K243 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC26.55■■□□□ 1.84
Trim68Q8K243 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC26.54■■□□□ 1.84
Trim68Q8K243 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.53■■□□□ 1.84
Trim68Q8K243 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Trim68Q8K243 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.52■■□□□ 1.84
Trim68Q8K243 Gm7432-201ENSMUST00000210343 879 ntBASIC26.51■■□□□ 1.83
Trim68Q8K243 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim68Q8K243 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim68Q8K243 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Trim68Q8K243 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Trim68Q8K243 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Trim68Q8K243 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Trim68Q8K243 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim68Q8K243 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Trim68Q8K243 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
Trim68Q8K243 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim68Q8K243 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Trim68Q8K243 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Trim68Q8K243 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Trim68Q8K243 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Trim68Q8K243 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.44■■□□□ 1.82
Trim68Q8K243 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Trim68Q8K243 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Trim68Q8K243 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Trim68Q8K243 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.43■■□□□ 1.82
Trim68Q8K243 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Trim68Q8K243 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
Trim68Q8K243 Zxda-201ENSMUST00000117281 2621 ntBASIC26.42■■□□□ 1.82
Trim68Q8K243 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Trim68Q8K243 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Trim68Q8K243 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
Trim68Q8K243 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
Trim68Q8K243 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Trim68Q8K243 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Trim68Q8K243 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Trim68Q8K243 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Trim68Q8K243 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
Trim68Q8K243 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC26.37■■□□□ 1.81
Trim68Q8K243 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Trim68Q8K243 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Trim68Q8K243 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Trim68Q8K243 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Trim68Q8K243 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Trim68Q8K243 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trim68Q8K243 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Trim68Q8K243 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Trim68Q8K243 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Trim68Q8K243 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.32■■□□□ 1.8
Trim68Q8K243 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Trim68Q8K243 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Trim68Q8K243 Gm11599-201ENSMUST00000118720 878 ntBASIC26.31■■□□□ 1.8
Trim68Q8K243 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trim68Q8K243 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Trim68Q8K243 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim68Q8K243 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trim68Q8K243 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Trim68Q8K243 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.28■■□□□ 1.8
Trim68Q8K243 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trim68Q8K243 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Trim68Q8K243 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Trim68Q8K243 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Trim68Q8K243 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.26■■□□□ 1.79
Trim68Q8K243 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trim68Q8K243 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim68Q8K243 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Trim68Q8K243 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trim68Q8K243 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.23■■□□□ 1.79
Trim68Q8K243 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.23■■□□□ 1.79
Trim68Q8K243 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.23■■□□□ 1.79
Trim68Q8K243 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim68Q8K243 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Trim68Q8K243 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim68Q8K243 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim68Q8K243 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Trim68Q8K243 Gm11175-201ENSMUST00000116172 543 ntBASIC26.2■■□□□ 1.78
Trim68Q8K243 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.2■■□□□ 1.78
Trim68Q8K243 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim68Q8K243 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms