Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
Rtn1Q8K0T0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC28.82■■■□□ 2.2
Rtn1Q8K0T0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Rtn1Q8K0T0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Rtn1Q8K0T0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Rtn1Q8K0T0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rtn1Q8K0T0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Rtn1Q8K0T0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Rtn1Q8K0T0 Gm6206-201ENSMUST00000133472 2199 ntBASIC28.8■■■□□ 2.2
Rtn1Q8K0T0 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.79■■■□□ 2.2
Rtn1Q8K0T0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC28.78■■■□□ 2.2
Rtn1Q8K0T0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Rtn1Q8K0T0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rtn1Q8K0T0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Rtn1Q8K0T0 Gm9905-201ENSMUST00000065740 1845 ntBASIC28.76■■■□□ 2.19
Rtn1Q8K0T0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Rtn1Q8K0T0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.76■■■□□ 2.19
Rtn1Q8K0T0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Rtn1Q8K0T0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC28.75■■■□□ 2.19
Rtn1Q8K0T0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC28.74■■■□□ 2.19
Rtn1Q8K0T0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Rtn1Q8K0T0 Gm9397-201ENSMUST00000200125 605 ntBASIC28.74■■■□□ 2.19
Rtn1Q8K0T0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
Rtn1Q8K0T0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rtn1Q8K0T0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rtn1Q8K0T0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rtn1Q8K0T0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC28.71■■■□□ 2.19
Rtn1Q8K0T0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Rtn1Q8K0T0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC28.68■■■□□ 2.18
Rtn1Q8K0T0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Rtn1Q8K0T0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.67■■■□□ 2.18
Rtn1Q8K0T0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rtn1Q8K0T0 Gm45855-201ENSMUST00000212546 880 ntBASIC28.66■■■□□ 2.18
Rtn1Q8K0T0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rtn1Q8K0T0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
Rtn1Q8K0T0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.65■■■□□ 2.18
Rtn1Q8K0T0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.64■■■□□ 2.18
Rtn1Q8K0T0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Rtn1Q8K0T0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Rtn1Q8K0T0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Rtn1Q8K0T0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rtn1Q8K0T0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Rtn1Q8K0T0 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC28.61■■■□□ 2.17
Rtn1Q8K0T0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Rtn1Q8K0T0 Gm43863-201ENSMUST00000203822 1192 ntBASIC28.6■■■□□ 2.17
Rtn1Q8K0T0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Rtn1Q8K0T0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Rtn1Q8K0T0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.59■■■□□ 2.17
Rtn1Q8K0T0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Rtn1Q8K0T0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Rtn1Q8K0T0 Gm24970-201ENSMUST00000175582 82 ntBASIC28.56■■■□□ 2.16
Rtn1Q8K0T0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.55■■■□□ 2.16
Rtn1Q8K0T0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC28.55■■■□□ 2.16
Rtn1Q8K0T0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
Rtn1Q8K0T0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Rtn1Q8K0T0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Rtn1Q8K0T0 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC28.53■■■□□ 2.16
Rtn1Q8K0T0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Rtn1Q8K0T0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.53■■■□□ 2.16
Rtn1Q8K0T0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC28.52■■■□□ 2.16
Rtn1Q8K0T0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC28.51■■■□□ 2.16
Rtn1Q8K0T0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Rtn1Q8K0T0 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC28.5■■■□□ 2.15
Rtn1Q8K0T0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
Rtn1Q8K0T0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rtn1Q8K0T0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.49■■■□□ 2.15
Rtn1Q8K0T0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Rtn1Q8K0T0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Rtn1Q8K0T0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC28.48■■■□□ 2.15
Rtn1Q8K0T0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Rtn1Q8K0T0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.48■■■□□ 2.15
Rtn1Q8K0T0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Rtn1Q8K0T0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Rtn1Q8K0T0 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.46■■■□□ 2.15
Rtn1Q8K0T0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Rtn1Q8K0T0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Rtn1Q8K0T0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rtn1Q8K0T0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rtn1Q8K0T0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rtn1Q8K0T0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Rtn1Q8K0T0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC28.43■■■□□ 2.14
Rtn1Q8K0T0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rtn1Q8K0T0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rtn1Q8K0T0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Rtn1Q8K0T0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rtn1Q8K0T0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC28.4■■■□□ 2.14
Rtn1Q8K0T0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rtn1Q8K0T0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rtn1Q8K0T0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rtn1Q8K0T0 Amer2-203ENSMUST00000225247 2662 ntBASIC28.36■■■□□ 2.13
Rtn1Q8K0T0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Rtn1Q8K0T0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rtn1Q8K0T0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rtn1Q8K0T0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rtn1Q8K0T0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Rtn1Q8K0T0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.35■■■□□ 2.13
Rtn1Q8K0T0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Rtn1Q8K0T0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rtn1Q8K0T0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rtn1Q8K0T0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms