Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Clip4Q8CI96 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Clip4Q8CI96 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
Clip4Q8CI96 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Clip4Q8CI96 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Clip4Q8CI96 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Clip4Q8CI96 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Clip4Q8CI96 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Clip4Q8CI96 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
Clip4Q8CI96 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Clip4Q8CI96 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Clip4Q8CI96 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Clip4Q8CI96 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Clip4Q8CI96 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
Clip4Q8CI96 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Clip4Q8CI96 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Clip4Q8CI96 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Clip4Q8CI96 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Clip4Q8CI96 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Clip4Q8CI96 Gm45855-201ENSMUST00000212546 880 ntBASIC24.58■■□□□ 1.53
Clip4Q8CI96 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Clip4Q8CI96 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Clip4Q8CI96 Gm9397-201ENSMUST00000200125 605 ntBASIC24.56■■□□□ 1.52
Clip4Q8CI96 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.56■■□□□ 1.52
Clip4Q8CI96 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
Clip4Q8CI96 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Clip4Q8CI96 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Clip4Q8CI96 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC24.53■■□□□ 1.52
Clip4Q8CI96 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.53■■□□□ 1.52
Clip4Q8CI96 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.53■■□□□ 1.52
Clip4Q8CI96 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Clip4Q8CI96 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Clip4Q8CI96 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC24.52■■□□□ 1.52
Clip4Q8CI96 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Clip4Q8CI96 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Clip4Q8CI96 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Clip4Q8CI96 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.51■■□□□ 1.51
Clip4Q8CI96 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Clip4Q8CI96 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Clip4Q8CI96 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Clip4Q8CI96 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Clip4Q8CI96 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Clip4Q8CI96 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
Clip4Q8CI96 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Clip4Q8CI96 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Clip4Q8CI96 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.48■■□□□ 1.51
Clip4Q8CI96 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC24.48■■□□□ 1.51
Clip4Q8CI96 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Clip4Q8CI96 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Clip4Q8CI96 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Clip4Q8CI96 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Clip4Q8CI96 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Clip4Q8CI96 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Clip4Q8CI96 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Clip4Q8CI96 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Clip4Q8CI96 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC24.44■■□□□ 1.5
Clip4Q8CI96 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Clip4Q8CI96 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.43■■□□□ 1.5
Clip4Q8CI96 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Clip4Q8CI96 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.42■■□□□ 1.5
Clip4Q8CI96 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC24.41■■□□□ 1.5
Clip4Q8CI96 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.4■■□□□ 1.5
Clip4Q8CI96 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Clip4Q8CI96 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Clip4Q8CI96 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Clip4Q8CI96 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
Clip4Q8CI96 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Clip4Q8CI96 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.38■■□□□ 1.49
Clip4Q8CI96 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.37■■□□□ 1.49
Clip4Q8CI96 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
Clip4Q8CI96 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.37■■□□□ 1.49
Clip4Q8CI96 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.37■■□□□ 1.49
Clip4Q8CI96 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Clip4Q8CI96 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.36■■□□□ 1.49
Clip4Q8CI96 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
Clip4Q8CI96 Gm24970-201ENSMUST00000175582 82 ntBASIC24.35■■□□□ 1.49
Clip4Q8CI96 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Clip4Q8CI96 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24.35■■□□□ 1.49
Clip4Q8CI96 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Clip4Q8CI96 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
Clip4Q8CI96 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Clip4Q8CI96 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Clip4Q8CI96 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.33■■□□□ 1.49
Clip4Q8CI96 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Clip4Q8CI96 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Clip4Q8CI96 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
Clip4Q8CI96 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Clip4Q8CI96 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Clip4Q8CI96 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Clip4Q8CI96 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Clip4Q8CI96 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Clip4Q8CI96 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Clip4Q8CI96 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Clip4Q8CI96 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Clip4Q8CI96 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Clip4Q8CI96 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Clip4Q8CI96 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Clip4Q8CI96 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Clip4Q8CI96 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Clip4Q8CI96 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms