Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC41.11■■■■■ 4.17
Pabpn1Q8CCS6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC41.1■■■■■ 4.17
Pabpn1Q8CCS6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC41.08■■■■■ 4.17
Pabpn1Q8CCS6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC41.08■■■■■ 4.17
Pabpn1Q8CCS6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC41.08■■■■■ 4.17
Pabpn1Q8CCS6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC41.04■■■■■ 4.16
Pabpn1Q8CCS6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC41.03■■■■■ 4.16
Pabpn1Q8CCS6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC40.99■■■■■ 4.15
Pabpn1Q8CCS6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC40.97■■■■■ 4.15
Pabpn1Q8CCS6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC40.94■■■■■ 4.14
Pabpn1Q8CCS6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC40.93■■■■■ 4.14
Pabpn1Q8CCS6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC40.93■■■■■ 4.14
Pabpn1Q8CCS6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC40.93■■■■■ 4.14
Pabpn1Q8CCS6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC40.92■■■■■ 4.14
Pabpn1Q8CCS6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC40.91■■■■■ 4.14
Pabpn1Q8CCS6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC40.9■■■■■ 4.14
Pabpn1Q8CCS6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC40.9■■■■■ 4.14
Pabpn1Q8CCS6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC40.84■■■■■ 4.13
Pabpn1Q8CCS6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC40.84■■■■■ 4.13
Pabpn1Q8CCS6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC40.84■■■■■ 4.13
Pabpn1Q8CCS6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC40.83■■■■■ 4.13
Pabpn1Q8CCS6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC40.81■■■■■ 4.12
Pabpn1Q8CCS6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC40.79■■■■■ 4.12
Pabpn1Q8CCS6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC40.79■■■■■ 4.12
Pabpn1Q8CCS6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC40.79■■■■■ 4.12
Pabpn1Q8CCS6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC40.75■■■■■ 4.11
Pabpn1Q8CCS6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC40.75■■■■■ 4.11
Pabpn1Q8CCS6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC40.74■■■■■ 4.11
Pabpn1Q8CCS6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC40.73■■■■■ 4.11
Pabpn1Q8CCS6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC40.72■■■■■ 4.11
Pabpn1Q8CCS6 Gm6311-201ENSMUST00000073790 878 ntBASIC40.72■■■■■ 4.11
Pabpn1Q8CCS6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC40.72■■■■■ 4.11
Pabpn1Q8CCS6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC40.72■■■■■ 4.11
Pabpn1Q8CCS6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC40.71■■■■■ 4.11
Pabpn1Q8CCS6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC40.69■■■■■ 4.1
Pabpn1Q8CCS6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC40.66■■■■■ 4.1
Pabpn1Q8CCS6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC40.66■■■■■ 4.1
Pabpn1Q8CCS6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC40.65■■■■■ 4.1
Pabpn1Q8CCS6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC40.65■■■■■ 4.1
Pabpn1Q8CCS6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC40.64■■■■■ 4.1
Pabpn1Q8CCS6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC40.64■■■■■ 4.1
Pabpn1Q8CCS6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC40.62■■■■■ 4.09
Pabpn1Q8CCS6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC40.62■■■■■ 4.09
Pabpn1Q8CCS6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC40.62■■■■■ 4.09
Pabpn1Q8CCS6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC40.6■■■■■ 4.09
Pabpn1Q8CCS6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC40.6■■■■■ 4.09
Pabpn1Q8CCS6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC40.6■■■■■ 4.09
Pabpn1Q8CCS6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC40.6■■■■■ 4.09
Pabpn1Q8CCS6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
Pabpn1Q8CCS6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC40.58■■■■■ 4.09
Pabpn1Q8CCS6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC40.56■■■■■ 4.08
Pabpn1Q8CCS6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC40.56■■■■■ 4.08
Pabpn1Q8CCS6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC40.55■■■■■ 4.08
Pabpn1Q8CCS6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC40.54■■■■■ 4.08
Pabpn1Q8CCS6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC40.53■■■■■ 4.08
Pabpn1Q8CCS6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC40.51■■■■■ 4.08
Pabpn1Q8CCS6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC40.51■■■■■ 4.08
Pabpn1Q8CCS6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC40.49■■■■■ 4.07
Pabpn1Q8CCS6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC40.49■■■■■ 4.07
Pabpn1Q8CCS6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC40.48■■■■■ 4.07
Pabpn1Q8CCS6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC40.48■■■■■ 4.07
Pabpn1Q8CCS6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC40.48■■■■■ 4.07
Pabpn1Q8CCS6 Gm22567-201ENSMUST00000175542 342 ntBASIC40.47■■■■■ 4.07
Pabpn1Q8CCS6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
Pabpn1Q8CCS6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
Pabpn1Q8CCS6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC40.43■■■■■ 4.06
Pabpn1Q8CCS6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC40.42■■■■■ 4.06
Pabpn1Q8CCS6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC40.41■■■■■ 4.06
Pabpn1Q8CCS6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
Pabpn1Q8CCS6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC40.38■■■■■ 4.05
Pabpn1Q8CCS6 Gm12366-201ENSMUST00000121722 873 ntBASIC40.38■■■■■ 4.05
Pabpn1Q8CCS6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC40.38■■■■■ 4.05
Pabpn1Q8CCS6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC40.38■■■■■ 4.05
Pabpn1Q8CCS6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC40.38■■■■■ 4.05
Pabpn1Q8CCS6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC40.38■■■■■ 4.05
Pabpn1Q8CCS6 Gm5786-201ENSMUST00000085368 882 ntBASIC40.38■■■■■ 4.05
Pabpn1Q8CCS6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC40.38■■■■■ 4.05
Pabpn1Q8CCS6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC40.38■■■■■ 4.05
Pabpn1Q8CCS6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC40.37■■■■■ 4.05
Pabpn1Q8CCS6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC40.37■■■■■ 4.05
Pabpn1Q8CCS6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC40.37■■■■■ 4.05
Pabpn1Q8CCS6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC40.34■■■■■ 4.05
Pabpn1Q8CCS6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC40.34■■■■■ 4.05
Pabpn1Q8CCS6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC40.34■■■■■ 4.05
Pabpn1Q8CCS6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC40.33■■■■■ 4.05
Pabpn1Q8CCS6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
Pabpn1Q8CCS6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
Pabpn1Q8CCS6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
Pabpn1Q8CCS6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC40.31■■■■■ 4.04
Pabpn1Q8CCS6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC40.3■■■■■ 4.04
Pabpn1Q8CCS6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC40.3■■■■■ 4.04
Pabpn1Q8CCS6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC40.29■■■■■ 4.04
Pabpn1Q8CCS6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC40.27■■■■■ 4.04
Pabpn1Q8CCS6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC40.26■■■■■ 4.04
Pabpn1Q8CCS6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC40.25■■■■■ 4.03
Pabpn1Q8CCS6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC40.24■■■■■ 4.03
Pabpn1Q8CCS6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC40.24■■■■■ 4.03
Pabpn1Q8CCS6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC40.24■■■■■ 4.03
Pabpn1Q8CCS6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC40.23■■■■■ 4.03
Pabpn1Q8CCS6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms