Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tsen54Q8C2A2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.37■□□□□ 0.85
Tsen54Q8C2A2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tsen54Q8C2A2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tsen54Q8C2A2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tsen54Q8C2A2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tsen54Q8C2A2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tsen54Q8C2A2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tsen54Q8C2A2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tsen54Q8C2A2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tsen54Q8C2A2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tsen54Q8C2A2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tsen54Q8C2A2 Gm6345-201ENSMUST00000180378 1691 ntBASIC20.34■□□□□ 0.85
Tsen54Q8C2A2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tsen54Q8C2A2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tsen54Q8C2A2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Tsen54Q8C2A2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Tsen54Q8C2A2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.31■□□□□ 0.84
Tsen54Q8C2A2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Tsen54Q8C2A2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tsen54Q8C2A2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tsen54Q8C2A2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tsen54Q8C2A2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Tsen54Q8C2A2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.3■□□□□ 0.84
Tsen54Q8C2A2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tsen54Q8C2A2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tsen54Q8C2A2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Tsen54Q8C2A2 Mipep-204ENSMUST00000225043 1548 ntBASIC20.28■□□□□ 0.84
Tsen54Q8C2A2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tsen54Q8C2A2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tsen54Q8C2A2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Tsen54Q8C2A2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tsen54Q8C2A2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Tsen54Q8C2A2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Tsen54Q8C2A2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.25■□□□□ 0.83
Tsen54Q8C2A2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Tsen54Q8C2A2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Tsen54Q8C2A2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Tsen54Q8C2A2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tsen54Q8C2A2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tsen54Q8C2A2 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tsen54Q8C2A2 Gm24804-201ENSMUST00000174982 85 ntBASIC20.2■□□□□ 0.82
Tsen54Q8C2A2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tsen54Q8C2A2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Tsen54Q8C2A2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Tsen54Q8C2A2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Tsen54Q8C2A2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tsen54Q8C2A2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tsen54Q8C2A2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tsen54Q8C2A2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tsen54Q8C2A2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tsen54Q8C2A2 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Tsen54Q8C2A2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Tsen54Q8C2A2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Tsen54Q8C2A2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tsen54Q8C2A2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tsen54Q8C2A2 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tsen54Q8C2A2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tsen54Q8C2A2 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tsen54Q8C2A2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tsen54Q8C2A2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tsen54Q8C2A2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tsen54Q8C2A2 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Tsen54Q8C2A2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tsen54Q8C2A2 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tsen54Q8C2A2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Tsen54Q8C2A2 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tsen54Q8C2A2 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Tsen54Q8C2A2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tsen54Q8C2A2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Tsen54Q8C2A2 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Tsen54Q8C2A2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tsen54Q8C2A2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.07■□□□□ 0.8
Tsen54Q8C2A2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.07■□□□□ 0.8
Tsen54Q8C2A2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tsen54Q8C2A2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tsen54Q8C2A2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tsen54Q8C2A2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Tsen54Q8C2A2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tsen54Q8C2A2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Tsen54Q8C2A2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tsen54Q8C2A2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tsen54Q8C2A2 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Tsen54Q8C2A2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tsen54Q8C2A2 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tsen54Q8C2A2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tsen54Q8C2A2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tsen54Q8C2A2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tsen54Q8C2A2 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tsen54Q8C2A2 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tsen54Q8C2A2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
Tsen54Q8C2A2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tsen54Q8C2A2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tsen54Q8C2A2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tsen54Q8C2A2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tsen54Q8C2A2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tsen54Q8C2A2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Tsen54Q8C2A2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tsen54Q8C2A2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Tsen54Q8C2A2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms