Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
Sh3rf2Q8BZT2 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Sh3rf2Q8BZT2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Sh3rf2Q8BZT2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Sh3rf2Q8BZT2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Sh3rf2Q8BZT2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Sh3rf2Q8BZT2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sh3rf2Q8BZT2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
Sh3rf2Q8BZT2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.51■■□□□ 1.67
Sh3rf2Q8BZT2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Sh3rf2Q8BZT2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Sh3rf2Q8BZT2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Sh3rf2Q8BZT2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sh3rf2Q8BZT2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Sh3rf2Q8BZT2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Sh3rf2Q8BZT2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Sh3rf2Q8BZT2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Sh3rf2Q8BZT2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
Sh3rf2Q8BZT2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC25.45■■□□□ 1.66
Sh3rf2Q8BZT2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Sh3rf2Q8BZT2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Sh3rf2Q8BZT2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC25.43■■□□□ 1.66
Sh3rf2Q8BZT2 Gm6821-201ENSMUST00000107540 542 ntBASIC25.42■■□□□ 1.66
Sh3rf2Q8BZT2 Gm8503-201ENSMUST00000118131 455 ntBASIC25.4■■□□□ 1.66
Sh3rf2Q8BZT2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
Sh3rf2Q8BZT2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Sh3rf2Q8BZT2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Sh3rf2Q8BZT2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Sh3rf2Q8BZT2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Sh3rf2Q8BZT2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Sh3rf2Q8BZT2 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sh3rf2Q8BZT2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sh3rf2Q8BZT2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.37■■□□□ 1.65
Sh3rf2Q8BZT2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Sh3rf2Q8BZT2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Sh3rf2Q8BZT2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Sh3rf2Q8BZT2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sh3rf2Q8BZT2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sh3rf2Q8BZT2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sh3rf2Q8BZT2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sh3rf2Q8BZT2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.35■■□□□ 1.65
Sh3rf2Q8BZT2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sh3rf2Q8BZT2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sh3rf2Q8BZT2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sh3rf2Q8BZT2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Sh3rf2Q8BZT2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sh3rf2Q8BZT2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
Sh3rf2Q8BZT2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sh3rf2Q8BZT2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Sh3rf2Q8BZT2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
Sh3rf2Q8BZT2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.3■■□□□ 1.64
Sh3rf2Q8BZT2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sh3rf2Q8BZT2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sh3rf2Q8BZT2 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Sh3rf2Q8BZT2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sh3rf2Q8BZT2 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Sh3rf2Q8BZT2 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.28■■□□□ 1.64
Sh3rf2Q8BZT2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Sh3rf2Q8BZT2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Sh3rf2Q8BZT2 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Sh3rf2Q8BZT2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Sh3rf2Q8BZT2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Sh3rf2Q8BZT2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Sh3rf2Q8BZT2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Sh3rf2Q8BZT2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sh3rf2Q8BZT2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.24■■□□□ 1.63
Sh3rf2Q8BZT2 Nkain2-201ENSMUST00000092602 558 ntBASIC25.21■■□□□ 1.63
Sh3rf2Q8BZT2 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.2■■□□□ 1.62
Sh3rf2Q8BZT2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Sh3rf2Q8BZT2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.19■■□□□ 1.62
Sh3rf2Q8BZT2 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.19■■□□□ 1.62
Sh3rf2Q8BZT2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Sh3rf2Q8BZT2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Sh3rf2Q8BZT2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Sh3rf2Q8BZT2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
Sh3rf2Q8BZT2 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Sh3rf2Q8BZT2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Sh3rf2Q8BZT2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Sh3rf2Q8BZT2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.15■■□□□ 1.62
Sh3rf2Q8BZT2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.15■■□□□ 1.62
Sh3rf2Q8BZT2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Sh3rf2Q8BZT2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
Sh3rf2Q8BZT2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Sh3rf2Q8BZT2 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.14■■□□□ 1.62
Sh3rf2Q8BZT2 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.13■■□□□ 1.61
Sh3rf2Q8BZT2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
Sh3rf2Q8BZT2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sh3rf2Q8BZT2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Sh3rf2Q8BZT2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Sh3rf2Q8BZT2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.09■■□□□ 1.61
Sh3rf2Q8BZT2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.08■■□□□ 1.61
Sh3rf2Q8BZT2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Sh3rf2Q8BZT2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Sh3rf2Q8BZT2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.08■■□□□ 1.61
Sh3rf2Q8BZT2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sh3rf2Q8BZT2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sh3rf2Q8BZT2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Sh3rf2Q8BZT2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.06■■□□□ 1.6
Sh3rf2Q8BZT2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Sh3rf2Q8BZT2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms