Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.3■□□□□ 0.84
Chd9Q8BYH8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chd9Q8BYH8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd9Q8BYH8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd9Q8BYH8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Chd9Q8BYH8 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chd9Q8BYH8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.28■□□□□ 0.84
Chd9Q8BYH8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Chd9Q8BYH8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.27■□□□□ 0.84
Chd9Q8BYH8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chd9Q8BYH8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Chd9Q8BYH8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Chd9Q8BYH8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chd9Q8BYH8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Chd9Q8BYH8 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Chd9Q8BYH8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.23■□□□□ 0.83
Chd9Q8BYH8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd9Q8BYH8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd9Q8BYH8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Chd9Q8BYH8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Chd9Q8BYH8 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.22■□□□□ 0.83
Chd9Q8BYH8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Chd9Q8BYH8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Chd9Q8BYH8 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.19■□□□□ 0.82
Chd9Q8BYH8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Chd9Q8BYH8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Chd9Q8BYH8 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Chd9Q8BYH8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Chd9Q8BYH8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Chd9Q8BYH8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Chd9Q8BYH8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.15■□□□□ 0.82
Chd9Q8BYH8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Chd9Q8BYH8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Chd9Q8BYH8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd9Q8BYH8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chd9Q8BYH8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd9Q8BYH8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd9Q8BYH8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chd9Q8BYH8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chd9Q8BYH8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chd9Q8BYH8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chd9Q8BYH8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Chd9Q8BYH8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chd9Q8BYH8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.1■□□□□ 0.81
Chd9Q8BYH8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chd9Q8BYH8 Nkain2-201ENSMUST00000092602 558 ntBASIC20.09■□□□□ 0.81
Chd9Q8BYH8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Chd9Q8BYH8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd9Q8BYH8 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Chd9Q8BYH8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chd9Q8BYH8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chd9Q8BYH8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chd9Q8BYH8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
Chd9Q8BYH8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Chd9Q8BYH8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chd9Q8BYH8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd9Q8BYH8 Gm5812-201ENSMUST00000061073 957 ntBASIC20.04■□□□□ 0.8
Chd9Q8BYH8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chd9Q8BYH8 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.03■□□□□ 0.8
Chd9Q8BYH8 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Chd9Q8BYH8 Gm6311-201ENSMUST00000073790 878 ntBASIC20.02■□□□□ 0.8
Chd9Q8BYH8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd9Q8BYH8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chd9Q8BYH8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chd9Q8BYH8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chd9Q8BYH8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Chd9Q8BYH8 Serp2-204ENSMUST00000228055 705 ntBASIC19.97■□□□□ 0.79
Chd9Q8BYH8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Chd9Q8BYH8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chd9Q8BYH8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.95■□□□□ 0.78
Chd9Q8BYH8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd9Q8BYH8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd9Q8BYH8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chd9Q8BYH8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chd9Q8BYH8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chd9Q8BYH8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chd9Q8BYH8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.93■□□□□ 0.78
Chd9Q8BYH8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Chd9Q8BYH8 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chd9Q8BYH8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Chd9Q8BYH8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.93■□□□□ 0.78
Chd9Q8BYH8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd9Q8BYH8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chd9Q8BYH8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd9Q8BYH8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chd9Q8BYH8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.9■□□□□ 0.78
Chd9Q8BYH8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Chd9Q8BYH8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Chd9Q8BYH8 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chd9Q8BYH8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.89■□□□□ 0.77
Chd9Q8BYH8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chd9Q8BYH8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chd9Q8BYH8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd9Q8BYH8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chd9Q8BYH8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.87■□□□□ 0.77
Chd9Q8BYH8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Chd9Q8BYH8 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.86■□□□□ 0.77
Chd9Q8BYH8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chd9Q8BYH8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
Chd9Q8BYH8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms